AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
-
AAI clade 1
medoid: human MGYG000000946
-
AAI clade 2
medoid: human MGYG000000019
-
AAI clade 3
medoid: human MGYG000003370
-
AAI clade 4
medoid: 3300027323 37
-
AAI clade 5
medoid: human MGYG000004185
-
AAI clade 6
medoid: human MGYG000001010
-
AAI clade 7
medoid: wastewater GEMS 3300025861 51
-
AAI clade 8
medoid: human MGYG000002603
-
AAI clade 9
medoid: 3300024953 8
-
AAI clade 10
medoid: 3300017423 5
-
AAI clade 11
medoid: pig GCA 946405745 1
-
AAI clade 12
medoid: 3300006192 20
-
AAI clade 13
medoid: pig LW1 s150947 bin 23
-
AAI clade 14
medoid: dog Snoopy p1 metabat2 high PE 009
-
AAI clade 15
medoid: pig MGYG000302081
-
AAI clade 16
medoid: human MGYG000000545
-
AAI clade 16-1
medoid: human MGYG000000545
-
AAI clade 16-2
medoid: ruminant GCA 015057715 1
-
AAI clade 16-3
medoid: human MGYG000000194
-
AAI clade 16-4
medoid: human MGYG000003326
-
AAI clade 16-5
medoid: human MGYG000000065
-
AAI clade 16-6
medoid: chicken MGYG000309273
-
AAI clade 16-7
medoid: human MGYG000003147
-
AAI clade 16-8
medoid: human MGYG000000076
-
AAI clade 16-9
medoid: human MGYG000000060
-
AAI clade 16-10
medoid: human MGYG000004403
-
AAI clade 16-11
medoid: human MGYG000001862
-
AAI clade 16-12
medoid: pig MGYG000301125
-
AAI clade 16-12-1
medoid: pig MGYG000301125
-
AAI clade 16-12-1-1
medoid: human MGYG000002279
-
AAI clade 16-12-1-2
medoid: cat SAMEA3387452 metabat2 high PE 017
-
AAI clade 16-12-1-3
medoid: human MGYG000001687
-
AAI clade 16-12-1-4
medoid: chicken DSTMC04003 metabat2 high PE 016
-
AAI clade 16-12-1-5
medoid: chicken GCA 019115645 1
-
AAI clade 16-12-1-6
medoid: chicken MGYG000308317
-
AAI clade 16-12-1-7
medoid: chicken MGYG000317661
-
AAI clade 16-12-1-8
medoid: human MGYG000001303
-
AAI clade 16-12-1-9
medoid: chicken GCA 018716485 1
-
AAI clade 16-12-1-10
medoid: chicken GCA 019114065 1
-
AAI clade 16-12-1-11
medoid: chicken GCA 019118525 1
1 dataset: chicken GCA 019118525 1 (AAI: 100.0%)
-
AAI clade 16-12-1-12
medoid: chicken GCA 019119285 1
-
AAI clade 16-12-1-13
medoid: chicken MGYG000314976
-
AAI clade 16-12-1-14
medoid: human MGYG000000067
-
AAI clade 16-12-1-15
medoid: human MGYG000000146
-
AAI clade 16-12-1-16
medoid: human MGYG000000165
-
AAI clade 16-12-1-17
medoid: human MGYG000000206
-
AAI clade 16-12-1-18
medoid: human MGYG000000586
-
AAI clade 16-12-1-19
medoid: human MGYG000000987
-
AAI clade 16-12-1-20
medoid: human MGYG000001607
-
AAI clade 16-12-1-21
medoid: human MGYG000001710
-
AAI clade 16-12-1-22
medoid: human MGYG000002018
-
AAI clade 16-12-1-23
medoid: human MGYG000004263
-
AAI clade 16-12-1-24
medoid: human MGYG000004572
-
AAI clade 16-12-1-25
medoid: human MGYG000004581
-
AAI clade 16-12-1-26
medoid: human MGYG000004697
-
AAI clade 16-12-1-27
medoid: pig LW1 s150822 bin 20
-
AAI clade 16-12-1-28
medoid: pig F4993 bin 15
-
AAI clade 16-12-1-29
medoid: pig F5244 bin 32
-
AAI clade 16-12-1-30
medoid: pig F5457 bin 33
-
AAI clade 16-12-1-31
medoid: pig GCA 016295505 1
-
AAI clade 16-12-1-32
medoid: pig LW2 s126610 bin 36
-
AAI clade 16-12-1-33
medoid: pig MGYG000300901
-
AAI clade 16-12-1-34
medoid: pig MGYG000300986
-
AAI clade 16-12-1-35
medoid: pig MGYG000301125
-
AAI clade 16-12-1-36
medoid: pig MGYG000301238
-
AAI clade 16-12-1-37
medoid: pig QHF6 unmapped bin 427
-
AAI clade 16-12-1-38
medoid: pig QHF6 unmapped bin 530
-
AAI clade 16-12-1-39
medoid: pig QHF6 unmapped bin 757
-
AAI clade 16-12-1-40
medoid: pig S129704B bin 35
-
AAI clade 16-12-1-41
medoid: pig S95012B bin 11
-
AAI clade 16-12-1-1
medoid: human MGYG000002279
-
AAI clade 16-12-2
medoid: dog Bissell p2 metabat2 high PE 001
-
AAI clade 16-12-1
medoid: pig MGYG000301125
-
AAI clade 16-13
medoid: human MGYG000001564
-
AAI clade 16-14
medoid: human MGYG000000200
-
AAI clade 16-15
medoid: chicken GCA 019120115 1
-
AAI clade 16-16
medoid: human MGYG000001964
-
AAI clade 16-17
medoid: pig Tibetan s3800 12F bin 25
-
AAI clade 16-18
medoid: human MGYG000003552
-
AAI clade 16-19
medoid: human MGYG000003597
-
AAI clade 16-20
medoid: human MGYG000002609
-
AAI clade 16-21
medoid: human MGYG000000018
-
AAI clade 16-22
medoid: human MGYG000001183
-
AAI clade 16-23
medoid: pig MGYG000301798
-
AAI clade 16-1
medoid: human MGYG000000545
-
AAI clade 17
medoid: human MGYG000003895
-
AAI clade 18
medoid: chicken MGYG000313561
-
AAI clade 19
medoid: 3300024912 1
-
AAI clade 20
medoid: human MGYG000002619
-
AAI clade 21
medoid: human MGYG000002428
-
AAI clade 22
medoid: 3300027805 13
-
AAI clade 23
medoid: chicken MGYG000314833
-
AAI clade 24
medoid: wastewater GEMS 3300027794 31
-
AAI clade 25
medoid: human MGYG000004406
-
AAI clade 26
medoid: pig MGYG000301788
-
AAI clade 27
medoid: 3300027834 52
-
AAI clade 28
medoid: 3300020389 13
-
AAI clade 29
medoid: 3300027835 270
-
AAI clade 30
medoid: 3300013004 97
-
AAI clade 31
medoid: 3300025065 6
-
AAI clade 32
medoid: human MGYG000004800
-
AAI clade 33
medoid: ruminant GCA 015060255 1
-
AAI clade 34
medoid: chicken GCA 019115885 1
-
AAI clade 35
medoid: pig SAMEA3663026 metabat2 high PE 017
-
AAI clade 36
medoid: human MGYG000000998
-
AAI clade 37
medoid: 3300012919 27
-
AAI clade 38
medoid: 3300027851 42
-
AAI clade 39
medoid: wastewater ye ASMAG566