AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: human MGYG000000946
  • AAI clade 2 medoid: human MGYG000000019
  • AAI clade 3 medoid: human MGYG000003370
  • AAI clade 4 medoid: 3300027323 37
  • AAI clade 5 medoid: human MGYG000004185
  • AAI clade 6 medoid: human MGYG000001010
  • AAI clade 7 medoid: wastewater GEMS 3300025861 51
  • AAI clade 8 medoid: human MGYG000002603
  • AAI clade 9 medoid: 3300024953 8
  • AAI clade 10 medoid: 3300017423 5
  • AAI clade 11 medoid: pig GCA 946405745 1
  • AAI clade 12 medoid: 3300006192 20
  • AAI clade 13 medoid: pig LW1 s150947 bin 23
  • AAI clade 14 medoid: dog Snoopy p1 metabat2 high PE 009
  • AAI clade 15 medoid: pig MGYG000302081
  • AAI clade 16 medoid: human MGYG000000545
    • AAI clade 16-1 medoid: human MGYG000000545
    • AAI clade 16-2 medoid: ruminant GCA 015057715 1
    • AAI clade 16-3 medoid: human MGYG000000194
    • AAI clade 16-4 medoid: human MGYG000003326
    • AAI clade 16-5 medoid: human MGYG000000065
    • AAI clade 16-6 medoid: chicken MGYG000309273
    • AAI clade 16-7 medoid: human MGYG000003147
    • AAI clade 16-8 medoid: human MGYG000000076
    • AAI clade 16-9 medoid: human MGYG000000060
    • AAI clade 16-10 medoid: human MGYG000004403
    • AAI clade 16-11 medoid: human MGYG000001862
    • AAI clade 16-12 medoid: pig MGYG000301125
    • AAI clade 16-13 medoid: human MGYG000001564
    • AAI clade 16-14 medoid: human MGYG000000200
    • AAI clade 16-15 medoid: chicken GCA 019120115 1
    • AAI clade 16-16 medoid: human MGYG000001964
    • AAI clade 16-17 medoid: pig Tibetan s3800 12F bin 25
    • AAI clade 16-18 medoid: human MGYG000003552
    • AAI clade 16-19 medoid: human MGYG000003597
    • AAI clade 16-20 medoid: human MGYG000002609
    • AAI clade 16-21 medoid: human MGYG000000018
    • AAI clade 16-22 medoid: human MGYG000001183
    • AAI clade 16-23 medoid: pig MGYG000301798
      • AAI clade 16-23-1 medoid: pig MGYG000301798
      • AAI clade 16-23-2 medoid: human MGYG000000721
      • AAI clade 16-23-3 medoid: human MGYG000000864
      • AAI clade 16-23-4 medoid: human MGYG000003929
  • AAI clade 17 medoid: human MGYG000003895
  • AAI clade 18 medoid: chicken MGYG000313561
  • AAI clade 19 medoid: 3300024912 1
  • AAI clade 20 medoid: human MGYG000002619
  • AAI clade 21 medoid: human MGYG000002428
  • AAI clade 22 medoid: 3300027805 13
  • AAI clade 23 medoid: chicken MGYG000314833
  • AAI clade 24 medoid: wastewater GEMS 3300027794 31
  • AAI clade 25 medoid: human MGYG000004406
  • AAI clade 26 medoid: pig MGYG000301788
  • AAI clade 27 medoid: 3300027834 52
  • AAI clade 28 medoid: 3300020389 13
  • AAI clade 29 medoid: 3300027835 270
  • AAI clade 30 medoid: 3300013004 97
  • AAI clade 31 medoid: 3300025065 6
  • AAI clade 32 medoid: human MGYG000004800
  • AAI clade 33 medoid: ruminant GCA 015060255 1
  • AAI clade 34 medoid: chicken GCA 019115885 1
  • AAI clade 35 medoid: pig SAMEA3663026 metabat2 high PE 017
  • AAI clade 36 medoid: human MGYG000000998
  • AAI clade 37 medoid: 3300012919 27
  • AAI clade 38 medoid: 3300027851 42
  • AAI clade 39 medoid: wastewater ye ASMAG566