AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
-
AAI clade 1
medoid: human MGYG000000946
-
AAI clade 2
medoid: human MGYG000000019
-
AAI clade 3
medoid: human MGYG000003370
-
AAI clade 4
medoid: 3300027323 37
-
AAI clade 5
medoid: human MGYG000004185
-
AAI clade 6
medoid: human MGYG000001010
-
AAI clade 7
medoid: wastewater GEMS 3300025861 51
-
AAI clade 8
medoid: human MGYG000002603
-
AAI clade 9
medoid: 3300024953 8
-
AAI clade 10
medoid: 3300017423 5
-
AAI clade 11
medoid: pig GCA 946405745 1
-
AAI clade 12
medoid: 3300006192 20
-
AAI clade 13
medoid: pig LW1 s150947 bin 23
-
AAI clade 14
medoid: dog Snoopy p1 metabat2 high PE 009
-
AAI clade 15
medoid: pig MGYG000302081
-
AAI clade 16
medoid: human MGYG000000545
-
AAI clade 17
medoid: human MGYG000003895
-
AAI clade 18
medoid: chicken MGYG000313561
-
AAI clade 19
medoid: 3300024912 1
-
AAI clade 20
medoid: human MGYG000002619
-
AAI clade 21
medoid: human MGYG000002428
-
AAI clade 22
medoid: 3300027805 13
-
AAI clade 23
medoid: chicken MGYG000314833
-
AAI clade 24
medoid: wastewater GEMS 3300027794 31
-
AAI clade 25
medoid: human MGYG000004406
-
AAI clade 25-1
medoid: human MGYG000004406
-
AAI clade 25-1-1
medoid: human MGYG000003090
-
AAI clade 25-1-2
medoid: chicken GCA 018716115 1
-
AAI clade 25-1-3
medoid: human MGYG000004406
-
AAI clade 25-1-4
medoid: human MGYG000000419
-
AAI clade 25-1-5
medoid: human MGYG000004391
-
AAI clade 25-1-6
medoid: pig S95006B bin 32
-
AAI clade 25-1-7
medoid: human MGYG000004038
-
AAI clade 25-1-8
medoid: human MGYG000004299
-
AAI clade 25-1-9
medoid: human MGYG000003981
-
AAI clade 25-1-10
medoid: human MGYG000004527
-
AAI clade 25-1-11
medoid: 3300000227 53
-
AAI clade 25-1-12
medoid: 3300014656 33
-
AAI clade 25-1-13
medoid: 3300017526 65
-
AAI clade 25-1-14
medoid: 3300027800 82
-
AAI clade 25-1-15
medoid: chicken MGYG000320339
-
AAI clade 25-1-16
medoid: chicken MGYG000310995
-
AAI clade 25-1-17
medoid: chicken MGYG000314507
-
AAI clade 25-1-18
medoid: chicken MGYG000315008
-
AAI clade 25-1-19
medoid: chicken MGYG000317592
-
AAI clade 25-1-20
medoid: human MGYG000000498
-
AAI clade 25-1-21
medoid: human MGYG000000784
-
AAI clade 25-1-22
medoid: human MGYG000001672
-
AAI clade 25-1-23
medoid: human MGYG000002139
-
AAI clade 25-1-24
medoid: human MGYG000004303
-
AAI clade 25-1-25
medoid: human MGYG000004741
-
AAI clade 25-1-26
medoid: pig F4596 bin 60
-
AAI clade 25-1-27
medoid: pig F4666 bin 55
-
AAI clade 25-1-28
medoid: pig F4726 bin 73
-
AAI clade 25-1-29
medoid: pig F5094 bin 42
1 dataset: pig F5094 bin 42 (AAI: 100.0%)
-
AAI clade 25-1-30
medoid: pig F5235 bin 41
-
AAI clade 25-1-31
medoid: pig F5509 bin 28
-
AAI clade 25-1-32
medoid: pig MGYG000299723
-
AAI clade 25-1-33
medoid: ruminant GCA 015059295 1
-
AAI clade 25-1-34
medoid: ruminant GCA 015059405 1
-
AAI clade 25-1-35
medoid: wastewater GEMS 3300025730 80
-
AAI clade 25-1-1
medoid: human MGYG000003090
-
AAI clade 25-2
medoid: human MGYG000003940
-
AAI clade 25-3
medoid: human MGYG000002814
-
AAI clade 25-4
medoid: human MGYG000001840
-
AAI clade 25-5
medoid: chicken MGYG000320396
-
AAI clade 25-6
medoid: human MGYG000000434
-
AAI clade 25-7
medoid: human MGYG000000465
-
AAI clade 25-8
medoid: human MGYG000004218
-
AAI clade 25-9
medoid: pig W4950 bin 8
-
AAI clade 25-10
medoid: chicken MGYG000315964
-
AAI clade 25-11
medoid: human MGYG000004102
-
AAI clade 25-12
medoid: pig MGYG000302538
-
AAI clade 25-13
medoid: human MGYG000002799
-
AAI clade 25-14
medoid: chicken MGYG000310138
-
AAI clade 25-15
medoid: human MGYG000002239
-
AAI clade 25-1
medoid: human MGYG000004406
-
AAI clade 26
medoid: pig MGYG000301788
-
AAI clade 27
medoid: 3300027834 52
-
AAI clade 28
medoid: 3300020389 13
-
AAI clade 29
medoid: 3300027835 270
-
AAI clade 30
medoid: 3300013004 97
-
AAI clade 31
medoid: 3300025065 6
-
AAI clade 32
medoid: human MGYG000004800
-
AAI clade 33
medoid: ruminant GCA 015060255 1
-
AAI clade 34
medoid: chicken GCA 019115885 1
-
AAI clade 35
medoid: pig SAMEA3663026 metabat2 high PE 017
-
AAI clade 36
medoid: human MGYG000000998
-
AAI clade 37
medoid: 3300012919 27
-
AAI clade 38
medoid: 3300027851 42
-
AAI clade 39
medoid: wastewater ye ASMAG566