AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: human MGYG000000946
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AAI clade 2
medoid: human MGYG000000019
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AAI clade 3
medoid: human MGYG000003370
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AAI clade 4
medoid: 3300027323 37
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AAI clade 5
medoid: human MGYG000004185
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AAI clade 6
medoid: human MGYG000001010
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AAI clade 7
medoid: wastewater GEMS 3300025861 51
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AAI clade 8
medoid: human MGYG000002603
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AAI clade 9
medoid: 3300024953 8
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AAI clade 10
medoid: 3300017423 5
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AAI clade 11
medoid: pig GCA 946405745 1
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AAI clade 12
medoid: 3300006192 20
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AAI clade 13
medoid: pig LW1 s150947 bin 23
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AAI clade 14
medoid: dog Snoopy p1 metabat2 high PE 009
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AAI clade 14-1
medoid: human MGYG000003699
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AAI clade 14-2
medoid: human MGYG000004591
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AAI clade 14-3
medoid: human MGYG000003653
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AAI clade 14-4
medoid: dog Snoopy p1 metabat2 high PE 009
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AAI clade 14-4-1
medoid: chicken MGYG000317985
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AAI clade 14-4-2
medoid: dog Snoopy p1 metabat2 high PE 009
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AAI clade 14-4-2-1
medoid: dog Snoopy p1 metabat2 high PE 009
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AAI clade 14-4-2-1-1
medoid: dog Snoopy p1 metabat2 high PE 009
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AAI clade 14-4-2-1-1-1
medoid: human MGYG000000670
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AAI clade 14-4-2-1-1-2
medoid: 3300013122 88
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AAI clade 14-4-2-1-1-3
medoid: 3300017473 11
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AAI clade 14-4-2-1-1-4
medoid: 3300021512 16
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AAI clade 14-4-2-1-1-5
medoid: 3300023179 45
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AAI clade 14-4-2-1-1-6
medoid: 3300024433 67
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AAI clade 14-4-2-1-1-7
medoid: 3300025738 51
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AAI clade 14-4-2-1-1-8
medoid: 3300026519 51
1 dataset: 3300026519 51 (AAI: 100.0%)
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AAI clade 14-4-2-1-1-9
medoid: 3300027685 50
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AAI clade 14-4-2-1-1-10
medoid: human MGYG000000269
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AAI clade 14-4-2-1-1-11
medoid: pig F5176 bin 35
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AAI clade 14-4-2-1-1-12
medoid: ruminant GCA 015058985 1
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AAI clade 14-4-2-1-1-1
medoid: human MGYG000000670
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AAI clade 14-4-2-1-2
medoid: 3300005858 25
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AAI clade 14-4-2-1-3
medoid: 3300027835 132
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AAI clade 14-4-2-1-4
medoid: wastewater GEMS 3300028625 26
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AAI clade 14-4-2-1-1
medoid: dog Snoopy p1 metabat2 high PE 009
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AAI clade 14-4-2-2
medoid: 3300027793 51
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AAI clade 14-4-2-3
medoid: wastewater GEMS 3300025682 89
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AAI clade 14-4-2-4
medoid: 3300013125 126
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AAI clade 14-4-2-5
medoid: 3300013136 188
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AAI clade 14-4-2-6
medoid: 3300014656 62
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AAI clade 14-4-2-7
medoid: 3300017473 22
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AAI clade 14-4-2-8
medoid: 3300027793 42
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AAI clade 14-4-2-9
medoid: 3300027057 8
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AAI clade 14-4-2-10
medoid: pig QHF6 unmapped bin 221
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AAI clade 14-4-2-11
medoid: pig SAMEA3663090 metabat2 low PE 007
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AAI clade 14-4-2-12
medoid: wastewater GEMS 3300025730 88
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AAI clade 14-4-2-1
medoid: dog Snoopy p1 metabat2 high PE 009
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AAI clade 14-4-3
medoid: 3300007722 87
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AAI clade 14-4-4
medoid: human MGYG000001487
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AAI clade 14-4-1
medoid: chicken MGYG000317985
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AAI clade 14-5
medoid: human MGYG000004288
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AAI clade 14-6
medoid: 3300027851 70
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AAI clade 14-7
medoid: human MGYG000003121
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AAI clade 14-8
medoid: human MGYG000002268
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AAI clade 14-9
medoid: human MGYG000001928
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AAI clade 14-10
medoid: ruminant GCA 015059145 1
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AAI clade 14-11
medoid: human MGYG000000134
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AAI clade 14-12
medoid: chicken MGYG000319641
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AAI clade 14-13
medoid: human MGYG000000037
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AAI clade 14-14
medoid: human MGYG000003507
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AAI clade 14-15
medoid: pig F5309 bin 12
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AAI clade 14-16
medoid: human MGYG000004545
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AAI clade 14-17
medoid: human MGYG000003292
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AAI clade 14-18
medoid: human MGYG000000686
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AAI clade 14-19
medoid: human MGYG000003568
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AAI clade 14-20
medoid: pig MGYG000302049
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AAI clade 14-21
medoid: human MGYG000000347
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AAI clade 14-22
medoid: 3300027973 12
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AAI clade 14-23
medoid: 3300020200 83
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AAI clade 14-24
medoid: 3300000227 15
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AAI clade 14-25
medoid: 3300025545 26
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AAI clade 14-26
medoid: 3300029821 40
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AAI clade 14-27
medoid: human MGYG000001403
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AAI clade 14-28
medoid: 3300027719 57
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AAI clade 14-29
medoid: 3300028569 72
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AAI clade 14-30
medoid: 3300014208 94
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AAI clade 14-31
medoid: 3300013137 178
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AAI clade 14-32
medoid: wastewater GEMS 3300025882 148
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AAI clade 14-33
medoid: ruminant GCA 015059065 1
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AAI clade 14-34
medoid: human MGYG000001421
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AAI clade 14-35
medoid: bird X103 Eurasian Blackcap maxbin2 low prob 003
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AAI clade 14-36
medoid: dog Ash p2 metabat2 high PE 029
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AAI clade 14-37
medoid: human MGYG000002779
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AAI clade 14-38
medoid: human MGYG000004488
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AAI clade 14-39
medoid: human MGYG000002950 1
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AAI clade 14-40
medoid: human MGYG000004600
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AAI clade 14-1
medoid: human MGYG000003699
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AAI clade 15
medoid: pig MGYG000302081
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AAI clade 16
medoid: human MGYG000000545
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AAI clade 17
medoid: human MGYG000003895
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AAI clade 18
medoid: chicken MGYG000313561
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AAI clade 19
medoid: 3300024912 1
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AAI clade 20
medoid: human MGYG000002619
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AAI clade 21
medoid: human MGYG000002428
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AAI clade 22
medoid: 3300027805 13
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AAI clade 23
medoid: chicken MGYG000314833
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AAI clade 24
medoid: wastewater GEMS 3300027794 31
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AAI clade 25
medoid: human MGYG000004406
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AAI clade 26
medoid: pig MGYG000301788
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AAI clade 27
medoid: 3300027834 52
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AAI clade 28
medoid: 3300020389 13
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AAI clade 29
medoid: 3300027835 270
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AAI clade 30
medoid: 3300013004 97
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AAI clade 31
medoid: 3300025065 6
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AAI clade 32
medoid: human MGYG000004800
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AAI clade 33
medoid: ruminant GCA 015060255 1
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AAI clade 34
medoid: chicken GCA 019115885 1
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AAI clade 35
medoid: pig SAMEA3663026 metabat2 high PE 017
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AAI clade 36
medoid: human MGYG000000998
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AAI clade 37
medoid: 3300012919 27
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AAI clade 38
medoid: 3300027851 42
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AAI clade 39
medoid: wastewater ye ASMAG566