AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
-
AAI clade 1
medoid: human MGYG000000946
-
AAI clade 2
medoid: human MGYG000000019
-
AAI clade 3
medoid: human MGYG000003370
-
AAI clade 4
medoid: 3300027323 37
-
AAI clade 5
medoid: human MGYG000004185
-
AAI clade 6
medoid: human MGYG000001010
-
AAI clade 7
medoid: wastewater GEMS 3300025861 51
-
AAI clade 8
medoid: human MGYG000002603
-
AAI clade 9
medoid: 3300024953 8
-
AAI clade 10
medoid: 3300017423 5
-
AAI clade 10-1
medoid: human MGYG000000082
-
AAI clade 10-2
medoid: human MGYG000002886
-
AAI clade 10-3
medoid: 3300025052 7
-
AAI clade 10-4
medoid: 3300028400 25
-
AAI clade 10-5
medoid: 3300017423 5
-
AAI clade 10-5-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-1-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-1-1-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-1-1-1-1-1-1
medoid: human MGYG000004151
-
AAI clade 10-5-1-1-1-1-1-1-1-1-2
medoid: 3300000517 10
-
AAI clade 10-5-1-1-1-1-1-1-1-1-3
medoid: 3300025132 5
-
AAI clade 10-5-1-1-1-1-1-1-1-1-4
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-1-1-1-1-1-5
medoid: 3300020186 20
-
AAI clade 10-5-1-1-1-1-1-1-1-1-6
medoid: 3300021512 6
-
AAI clade 10-5-1-1-1-1-1-1-1-1-7
medoid: 3300022933 34
-
AAI clade 10-5-1-1-1-1-1-1-1-1-8
medoid: 3300025236 9
-
AAI clade 10-5-1-1-1-1-1-1-1-1-9
medoid: 3300025632 9
-
AAI clade 10-5-1-1-1-1-1-1-1-1-10
medoid: 3300027128 7
-
AAI clade 10-5-1-1-1-1-1-1-1-1-11
medoid: 3300027796 34
-
AAI clade 10-5-1-1-1-1-1-1-1-1-12
medoid: 3300027800 11
-
AAI clade 10-5-1-1-1-1-1-1-1-1-13
medoid: 3300027852 42
-
AAI clade 10-5-1-1-1-1-1-1-1-1-14
medoid: chicken MGYG000308363
-
AAI clade 10-5-1-1-1-1-1-1-1-1-15
medoid: cow X137 Gaur metabat2 high PE 003
1 dataset: cow X137 Gaur metabat2 high PE 003 (AAI: 100.0%)
-
AAI clade 10-5-1-1-1-1-1-1-1-1-16
medoid: human MGYG000001457
-
AAI clade 10-5-1-1-1-1-1-1-1-1-17
medoid: pig GCA 018384595 1
-
AAI clade 10-5-1-1-1-1-1-1-1-1-18
medoid: pig MGYG000299914
-
AAI clade 10-5-1-1-1-1-1-1-1-1-19
medoid: pig MGYG000299971
-
AAI clade 10-5-1-1-1-1-1-1-1-1-20
medoid: wastewater ye ASMAG290
-
AAI clade 10-5-1-1-1-1-1-1-1-1-21
medoid: wastewater ye ASMAG530
-
AAI clade 10-5-1-1-1-1-1-1-1-1-1
medoid: human MGYG000004151
-
AAI clade 10-5-1-1-1-1-1-1-1-2
medoid: 3300000232 18
-
AAI clade 10-5-1-1-1-1-1-1-1-3
medoid: 3300020213 61
-
AAI clade 10-5-1-1-1-1-1-1-1-4
medoid: 3300027815 64
-
AAI clade 10-5-1-1-1-1-1-1-1-5
medoid: 3300027835 70
-
AAI clade 10-5-1-1-1-1-1-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-1-1-1-2
medoid: 3300013126 96
-
AAI clade 10-5-1-1-1-1-1-1-3
medoid: 3300015360 115
-
AAI clade 10-5-1-1-1-1-1-1-4
medoid: 3300025641 34
-
AAI clade 10-5-1-1-1-1-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-1-1-2
medoid: wastewater GEMS 3300027789 15
-
AAI clade 10-5-1-1-1-1-1-3
medoid: 3300013097 8
-
AAI clade 10-5-1-1-1-1-1-4
medoid: wastewater ye ASMAG1708
-
AAI clade 10-5-1-1-1-1-1-5
medoid: wastewater ye ASMAG507
-
AAI clade 10-5-1-1-1-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-1-2
medoid: 3300024060 40
-
AAI clade 10-5-1-1-1-1-3
medoid: 3300029899 7
-
AAI clade 10-5-1-1-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-1-2
medoid: 3300009084 164
-
AAI clade 10-5-1-1-1-3
medoid: 3300010160 56
-
AAI clade 10-5-1-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-1-2
medoid: 3300027835 128
-
AAI clade 10-5-1-1-1
medoid: 3300017423 5
-
AAI clade 10-5-1-2
medoid: 3300027828 26
-
AAI clade 10-5-1-1
medoid: 3300017423 5
-
AAI clade 10-5-2
medoid: 3300028559 21
-
AAI clade 10-5-3
medoid: 3300023179 21
-
AAI clade 10-5-4
medoid: 3300020430 4
-
AAI clade 10-5-5
medoid: wastewater ye ASMAG542
-
AAI clade 10-5-1
medoid: 3300017423 5
-
AAI clade 10-6
medoid: bird GCA 002901425 1
-
AAI clade 10-7
medoid: 3300017958 37
-
AAI clade 10-8
medoid: 3300025694 19
-
AAI clade 10-9
medoid: 3300024320 7
-
AAI clade 10-10
medoid: 3300027672 19
-
AAI clade 10-11
medoid: 3300026534 43
-
AAI clade 10-12
medoid: wastewater singleton GCA 016712865 1 ASM1671286v1 genomic
-
AAI clade 10-13
medoid: wastewater singleton GCA 016699715 1 ASM1669971v1 genomic
-
AAI clade 10-14
medoid: wastewater ye ASMAG1984
-
AAI clade 10-15
medoid: 3300020445 5
-
AAI clade 10-16
medoid: 3300025832 16
-
AAI clade 10-17
medoid: 3300014843 2
-
AAI clade 10-18
medoid: 3300025128 5
-
AAI clade 10-19
medoid: 3300025039 9
-
AAI clade 10-20
medoid: 3300020471 5
-
AAI clade 10-21
medoid: 3300020428 11
-
AAI clade 10-22
medoid: 3300025114 7
-
AAI clade 10-23
medoid: 3300026264 4
-
AAI clade 10-24
medoid: 3300024278 8
-
AAI clade 10-25
medoid: 3300027834 41
-
AAI clade 10-26
medoid: 3300020477 52
-
AAI clade 10-27
medoid: wastewater singleton GCA 016721845 1 ASM1672184v1 genomic
-
AAI clade 10-28
medoid: wastewater ye ASMAG1069
-
AAI clade 10-29
medoid: 3300020255 7
-
AAI clade 10-30
medoid: wastewater ye ASMAG1623
-
AAI clade 10-31
medoid: 3300027801 7
-
AAI clade 10-32
medoid: 3300012920 31
-
AAI clade 10-33
medoid: wastewater singleton GCA 016704655 1 ASM1670465v1 genomic
-
AAI clade 10-34
medoid: wastewater singleton GCA 016713135 1 ASM1671313v1 genomic
-
AAI clade 10-35
medoid: 3300018048 42
-
AAI clade 10-36
medoid: 3300025670 25
-
AAI clade 10-37
medoid: 3300027870 54
-
AAI clade 10-38
medoid: 3300025673 14
-
AAI clade 10-39
medoid: 3300027859 10
-
AAI clade 10-40
medoid: 3300027779 19
-
AAI clade 10-41
medoid: 3300027828 48
-
AAI clade 10-42
medoid: wastewater ye ASMAG670
-
AAI clade 10-43
medoid: wastewater GEMS 3300012020 16
-
AAI clade 10-44
medoid: wastewater ye ASMAG211
-
AAI clade 10-1
medoid: human MGYG000000082
-
AAI clade 11
medoid: pig GCA 946405745 1
-
AAI clade 12
medoid: 3300006192 20
-
AAI clade 13
medoid: pig LW1 s150947 bin 23
-
AAI clade 14
medoid: dog Snoopy p1 metabat2 high PE 009
-
AAI clade 15
medoid: pig MGYG000302081
-
AAI clade 16
medoid: human MGYG000000545
-
AAI clade 17
medoid: human MGYG000003895
-
AAI clade 18
medoid: chicken MGYG000313561
-
AAI clade 19
medoid: 3300024912 1
-
AAI clade 20
medoid: human MGYG000002619
-
AAI clade 21
medoid: human MGYG000002428
-
AAI clade 22
medoid: 3300027805 13
-
AAI clade 23
medoid: chicken MGYG000314833
-
AAI clade 24
medoid: wastewater GEMS 3300027794 31
-
AAI clade 25
medoid: human MGYG000004406
-
AAI clade 26
medoid: pig MGYG000301788
-
AAI clade 27
medoid: 3300027834 52
-
AAI clade 28
medoid: 3300020389 13
-
AAI clade 29
medoid: 3300027835 270
-
AAI clade 30
medoid: 3300013004 97
-
AAI clade 31
medoid: 3300025065 6
-
AAI clade 32
medoid: human MGYG000004800
-
AAI clade 33
medoid: ruminant GCA 015060255 1
-
AAI clade 34
medoid: chicken GCA 019115885 1
-
AAI clade 35
medoid: pig SAMEA3663026 metabat2 high PE 017
-
AAI clade 36
medoid: human MGYG000000998
-
AAI clade 37
medoid: 3300012919 27
-
AAI clade 38
medoid: 3300027851 42
-
AAI clade 39
medoid: wastewater ye ASMAG566