AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
-
AAI clade 1
medoid: human MGYG000000946
-
AAI clade 2
medoid: human MGYG000000019
-
AAI clade 3
medoid: human MGYG000003370
-
AAI clade 4
medoid: 3300027323 37
-
AAI clade 5
medoid: human MGYG000004185
-
AAI clade 6
medoid: human MGYG000001010
-
AAI clade 7
medoid: wastewater GEMS 3300025861 51
-
AAI clade 8
medoid: human MGYG000002603
-
AAI clade 9
medoid: 3300024953 8
-
AAI clade 10
medoid: 3300017423 5
-
AAI clade 11
medoid: pig GCA 946405745 1
-
AAI clade 12
medoid: 3300006192 20
-
AAI clade 13
medoid: pig LW1 s150947 bin 23
-
AAI clade 14
medoid: dog Snoopy p1 metabat2 high PE 009
-
AAI clade 15
medoid: pig MGYG000302081
-
AAI clade 16
medoid: human MGYG000000545
-
AAI clade 17
medoid: human MGYG000003895
-
AAI clade 18
medoid: chicken MGYG000313561
-
AAI clade 19
medoid: 3300024912 1
-
AAI clade 20
medoid: human MGYG000002619
-
AAI clade 21
medoid: human MGYG000002428
-
AAI clade 22
medoid: 3300027805 13
-
AAI clade 23
medoid: chicken MGYG000314833
-
AAI clade 24
medoid: wastewater GEMS 3300027794 31
-
AAI clade 25
medoid: human MGYG000004406
-
AAI clade 26
medoid: pig MGYG000301788
-
AAI clade 27
medoid: 3300027834 52
-
AAI clade 28
medoid: 3300020389 13
-
AAI clade 28-1
medoid: 3300020204 60
-
AAI clade 28-2
medoid: 3300017434 15
-
AAI clade 28-3
medoid: wastewater ye ASMAG1029
-
AAI clade 28-4
medoid: 3300025707 11
-
AAI clade 28-5
medoid: wastewater ye ASMAG1605
-
AAI clade 28-6
medoid: 3300027850 35
-
AAI clade 28-7
medoid: wastewater GEMS 3300025714 2
-
AAI clade 28-7-1
medoid: 3300002053 36
-
AAI clade 28-7-2
medoid: 3300011118 28
-
AAI clade 28-7-3
medoid: 3300011118 30
-
AAI clade 28-7-4
medoid: 3300013129 15
-
AAI clade 28-7-5
medoid: 3300017522 24
-
AAI clade 28-7-6
medoid: 3300024262 16
-
AAI clade 28-7-7
medoid: wastewater GEMS 3300025784 3
-
AAI clade 28-7-8
medoid: 3300027723 3
1 dataset: 3300027723 3 (AAI: 100.0%)
-
AAI clade 28-7-9
medoid: 3300027896 13
-
AAI clade 28-7-10
medoid: wastewater GEMS 3300025686 5
-
AAI clade 28-7-1
medoid: 3300002053 36
-
AAI clade 28-8
medoid: 3300023184 22
-
AAI clade 28-9
medoid: 3300020477 11
-
AAI clade 28-10
medoid: 3300027607 35
-
AAI clade 28-11
medoid: 3300027852 41
-
AAI clade 28-12
medoid: 3300013132 77
-
AAI clade 28-13
medoid: 3300027337 3
-
AAI clade 28-14
medoid: wastewater ye ASMAG927
-
AAI clade 28-15
medoid: wastewater ye ASMAG369
-
AAI clade 28-16
medoid: 3300027963 10
-
AAI clade 28-17
medoid: 3300027299 1
-
AAI clade 28-18
medoid: 3300020466 13
-
AAI clade 28-19
medoid: 3300017788 33
-
AAI clade 28-20
medoid: 3300028177 19
-
AAI clade 28-21
medoid: 3300012950 8
-
AAI clade 28-22
medoid: wastewater GEMS 3300025631 17
-
AAI clade 28-23
medoid: 3300020428 10
-
AAI clade 28-24
medoid: 3300025477 10
-
AAI clade 28-25
medoid: wastewater ye ASMAG1243
-
AAI clade 28-1
medoid: 3300020204 60
-
AAI clade 29
medoid: 3300027835 270
-
AAI clade 30
medoid: 3300013004 97
-
AAI clade 31
medoid: 3300025065 6
-
AAI clade 32
medoid: human MGYG000004800
-
AAI clade 33
medoid: ruminant GCA 015060255 1
-
AAI clade 34
medoid: chicken GCA 019115885 1
-
AAI clade 35
medoid: pig SAMEA3663026 metabat2 high PE 017
-
AAI clade 36
medoid: human MGYG000000998
-
AAI clade 37
medoid: 3300012919 27
-
AAI clade 38
medoid: 3300027851 42
-
AAI clade 39
medoid: wastewater ye ASMAG566