AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: asm GCA 900155255 1
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AAI clade 2
medoid: asm GCA 003225555 1
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AAI clade 3
medoid: miga PS19A HMP 2012 SRS017439 bin 51
-
AAI clade 4
medoid: miga BA16A LX33 339
-
AAI clade 5
medoid: asm GCA 002344625 1
-
AAI clade 6
medoid: miga ZQ19A BG 240
-
AAI clade 6-1
medoid: asm GCA 003854975 1
-
AAI clade 6-2
medoid: miga ZQ19A BG 240
-
AAI clade 6-2-1
medoid: asm GCA 003818195 1
-
AAI clade 6-2-2
medoid: asm GCA 003818605 1
-
AAI clade 6-2-3
medoid: asm GCA 002428215 1
-
AAI clade 6-2-4
medoid: miga ZQ19A BG 240
-
AAI clade 6-2-4-1
medoid: asm GCA 900491515 1
-
AAI clade 6-2-4-2
medoid: miga ZQ19A BG 240
-
AAI clade 6-2-4-3
medoid: asm GCA 002401055 1
-
AAI clade 6-2-4-4
medoid: asm GCA 002746335 1
-
AAI clade 6-2-4-5
medoid: asm GCA 002400975 1
-
AAI clade 6-2-4-6
medoid: asm GCA 002869425 1
-
AAI clade 6-2-4-7
medoid: asm GCA 002869335 1
-
AAI clade 6-2-4-8
medoid: asm GCA 004292785 1
-
AAI clade 6-2-4-9
medoid: asm GCA 004292985 1
-
AAI clade 6-2-4-10
medoid: asm GCA 004293815 1
-
AAI clade 6-2-4-11
medoid: asm GCA 004293905 1
-
AAI clade 6-2-4-12
medoid: asm GCA 900152435 1
-
AAI clade 6-2-4-13
medoid: asm GCA 002215675 1
-
AAI clade 6-2-4-14
medoid: asm GCA 003565295 1
-
AAI clade 6-2-4-15
medoid: asm GCA 002325615 1
-
AAI clade 6-2-4-16
medoid: asm GCA 002317115 1
-
AAI clade 6-2-4-17
medoid: asm GCA 002371705 1
-
AAI clade 6-2-4-18
medoid: asm GCA 002343305 1
-
AAI clade 6-2-4-19
medoid: asm GCA 002389785 1
-
AAI clade 6-2-4-20
medoid: asm GCA 002483345 1
-
AAI clade 6-2-4-21
medoid: asm GCA 002428415 1
-
AAI clade 6-2-4-22
medoid: asm GCA 002340355 1
-
AAI clade 6-2-4-23
medoid: miga ZQ19A BG 687
-
AAI clade 6-2-4-24
medoid: asm GCA 002325045 1
-
AAI clade 6-2-4-25
medoid: asm GCA 002453265 1
1 dataset: asm GCA 002453265 1 (AAI: 100.0%)
-
AAI clade 6-2-4-26
medoid: asm GCA 002427755 1
-
AAI clade 6-2-4-27
medoid: asm GCA 001768975 1
-
AAI clade 6-2-4-28
medoid: asm GCA 001769355 1
-
AAI clade 6-2-4-29
medoid: asm GCA 003648305 1
-
AAI clade 6-2-4-30
medoid: asm GCA 003648355 1
-
AAI clade 6-2-4-31
medoid: asm GCA 002457675 1
-
AAI clade 6-2-4-32
medoid: gb PLYJ00000000
-
AAI clade 6-2-4-33
medoid: gb MENU00000000
-
AAI clade 6-2-4-34
medoid: miga DE18A TARA ANW MAG 00034
-
AAI clade 6-2-4-35
medoid: miga DE18A TARA PSW MAG 00067
-
AAI clade 6-2-4-36
medoid: miga ZQ19A BG 006
-
AAI clade 6-2-4-37
medoid: miga ZQ19A BG 075
-
AAI clade 6-2-4-38
medoid: miga ZQ19A BG 111
-
AAI clade 6-2-4-39
medoid: miga ZQ19A BG 246
-
AAI clade 6-2-4-40
medoid: miga ZQ19A BG 566
-
AAI clade 6-2-4-41
medoid: miga ZQ19A BG 682
-
AAI clade 6-2-4-42
medoid: miga AP18A bin 16
-
AAI clade 6-2-4-43
medoid: asm GCA 002784125 1
-
AAI clade 6-2-4-1
medoid: asm GCA 900491515 1
-
AAI clade 6-2-5
medoid: asm GCA 002898195 1
-
AAI clade 6-2-6
medoid: asm GCA 001871695 1
-
AAI clade 6-2-7
medoid: asm GCA 002384205 1
-
AAI clade 6-2-8
medoid: asm GCA 002400835 1
-
AAI clade 6-2-9
medoid: asm GCA 002746535 1
-
AAI clade 6-2-10
medoid: asm GCA 003972955 1
-
AAI clade 6-2-11
medoid: asm GCA 002254285 1
-
AAI clade 6-2-12
medoid: asm GCA 003978465 1
-
AAI clade 6-2-13
medoid: asm GCA 004294185 1
-
AAI clade 6-2-14
medoid: asm GCA 900155245 1
-
AAI clade 6-2-15
medoid: asm GCA 004294265 1
-
AAI clade 6-2-16
medoid: asm GCA 002422865 1
-
AAI clade 6-2-17
medoid: asm GCA 002483185 1
-
AAI clade 6-2-18
medoid: asm GCA 002787815 1
-
AAI clade 6-2-19
medoid: asm GCA 003670475 1
-
AAI clade 6-2-20
medoid: asm GCA 002308095 1
-
AAI clade 6-2-21
medoid: gb LNBX00000000
-
AAI clade 6-2-22
medoid: miga MW14 contigs 6666666 37195
-
AAI clade 6-2-23
medoid: asm GCA 002428905 1
-
AAI clade 6-2-24
medoid: asm GCA 002436105 1
-
AAI clade 6-2-25
medoid: asm GCA 002454295 1
-
AAI clade 6-2-26
medoid: asm GCA 002452405 1
-
AAI clade 6-2-27
medoid: asm GCA 002347225 1
-
AAI clade 6-2-28
medoid: asm GCA 002415465 1
-
AAI clade 6-2-29
medoid: asm GCA 002422505 1
-
AAI clade 6-2-30
medoid: miga DE18A TARA SOC MAG 00012
-
AAI clade 6-2-31
medoid: asm GCA 002500645 1
-
AAI clade 6-2-32
medoid: asm GCA 002346585 1
-
AAI clade 6-2-33
medoid: asm GCA 002403175 1
-
AAI clade 6-2-34
medoid: asm GCA 002308555 1
-
AAI clade 6-2-35
medoid: asm GCA 002327905 1
-
AAI clade 6-2-36
medoid: asm GCA 001794935 1
-
AAI clade 6-2-37
medoid: asm GCA 001828515 1
-
AAI clade 6-2-38
medoid: asm GCA 001829155 1
-
AAI clade 6-2-39
medoid: asm GCA 003022985 1
-
AAI clade 6-2-40
medoid: asm GCA 003265905 1
-
AAI clade 6-2-41
medoid: asm GCA 003648725 1
-
AAI clade 6-2-42
medoid: asm GCA 003558915 1
-
AAI clade 6-2-43
medoid: asm GCA 003563615 1
-
AAI clade 6-2-44
medoid: asm GCA 003558145 1
-
AAI clade 6-2-45
medoid: asm GCA 002084425 1
-
AAI clade 6-2-46
medoid: asm GCA 003648565 1
-
AAI clade 6-2-47
medoid: asm GCA 002084765 1
-
AAI clade 6-2-48
medoid: asm GCA 003641405 1
-
AAI clade 6-2-49
medoid: asm GCA 003644145 1
-
AAI clade 6-2-50
medoid: asm GCA 003647745 1
-
AAI clade 6-2-51
medoid: asm GCA 003648225 1
-
AAI clade 6-2-52
medoid: asm GCA 000503875 1
-
AAI clade 6-2-53
medoid: asm GCA 001508435 1
-
AAI clade 6-2-54
medoid: asm GCA 001920095 1
-
AAI clade 6-2-55
medoid: asm GCA 001917785 1
-
AAI clade 6-2-56
medoid: asm GCF 001482755 1
-
AAI clade 6-2-57
medoid: miga WB18A mgm4762873 3 050 upload
-
AAI clade 6-2-58
medoid: gb MFIX00000000
-
AAI clade 6-2-59
medoid: gb MEWA00000000
-
AAI clade 6-2-60
medoid: gb APCU00000000
-
AAI clade 6-2-61
medoid: gb JYPD00000000
-
AAI clade 6-2-62
medoid: miga FB16A MM6
-
AAI clade 6-2-63
medoid: miga DE18A TARA PSE MAG 00033
-
AAI clade 6-2-64
medoid: miga DE18A TARA PSE MAG 00043
-
AAI clade 6-2-65
medoid: miga DE18A TARA PSE MAG 00125
-
AAI clade 6-2-66
medoid: miga DE18A TARA PSW MAG 00117
-
AAI clade 6-2-67
medoid: miga DE18A TARA RED MAG 00047
-
AAI clade 6-2-68
medoid: miga SW19B 10674 min2k bin 2928
-
AAI clade 6-2-69
medoid: miga AH17A FS844 Bin 37
-
AAI clade 6-2-70
medoid: miga ZQ19A BG 165
-
AAI clade 6-2-71
medoid: miga ZQ19A BG 421
-
AAI clade 6-2-72
medoid: miga ZQ19A BG 694
-
AAI clade 6-2-73
medoid: miga AP18A bin 60
-
AAI clade 6-2-74
medoid: miga PS19A FengQ 2015 SID31112 bin 2
-
AAI clade 6-2-75
medoid: miga PS19A OhJ 2014 MET0207 megahit bin 20
-
AAI clade 6-2-76
medoid: miga PS19A VogtmannE 2016 MMRS97052561ST 27 0 0 bin 35
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AAI clade 6-2-77
medoid: asm GCA 008586845 1
-
AAI clade 6-2-78
medoid: asm GCA 002783545 1
-
AAI clade 6-2-79
medoid: asm GCA 002791375 1
-
AAI clade 6-2-80
medoid: asm GCA 002791975 1
-
AAI clade 6-2-81
medoid: miga WD15A P1181 102 51
-
AAI clade 6-2-1
medoid: asm GCA 003818195 1
-
AAI clade 6-3
medoid: gb PMZO00000000
-
AAI clade 6-4
medoid: asm GCA 002426145 1
-
AAI clade 6-5
medoid: gb LLZO00000000
-
AAI clade 6-6
medoid: asm GCA 001802995 1
-
AAI clade 6-7
medoid: asm GCA 900000315 1
-
AAI clade 6-8
medoid: gb PMJR00000000
-
AAI clade 6-9
medoid: asm GCA 002737625 1
-
AAI clade 6-10
medoid: asm GCA 001769385 1
-
AAI clade 6-11
medoid: asm GCA 002049825 1
-
AAI clade 6-12
medoid: asm GCA 001603415 1
-
AAI clade 6-13
medoid: miga SW19B 10676 0021 idba bin 44
-
AAI clade 6-14
medoid: asm GCA 001603625 1
-
AAI clade 6-15
medoid: asm GCA 002432165 1
-
AAI clade 6-16
medoid: asm GCA 001802685 1
-
AAI clade 6-17
medoid: miga WD15A P1163 101 38
-
AAI clade 6-18
medoid: asm GCF 000365325 1
-
AAI clade 6-19
medoid: asm GCA 003648385 1
-
AAI clade 6-20
medoid: asm GCA 002336655 1
-
AAI clade 6-21
medoid: miga DE18A TARA ANW MAG 00013
-
AAI clade 6-22
medoid: asm GCA 003973085 1
-
AAI clade 6-23
medoid: gb LADZ00000000
-
AAI clade 6-24
medoid: asm GCA 002427735 1
-
AAI clade 6-25
medoid: asm GCF 000021565 1
-
AAI clade 6-26
medoid: gb MEOL00000000
-
AAI clade 6-27
medoid: asm GCA 001768355 1
-
AAI clade 6-28
medoid: asm GCA 002293185 1
-
AAI clade 6-29
medoid: asm GCA 004292865 1
-
AAI clade 6-30
medoid: asm GCA 001577105 1
-
AAI clade 6-31
medoid: asm GCA 003648635 1
-
AAI clade 6-32
medoid: asm GCA 001775405 1
-
AAI clade 6-33
medoid: miga SW19B 10677 0015 idba bin 194
-
AAI clade 6-34
medoid: gb PLLO00000000
-
AAI clade 6-35
medoid: gb PLMC00000000
-
AAI clade 6-36
medoid: miga AP18A bin 81
-
AAI clade 6-37
medoid: asm GCA 003550825 1
-
AAI clade 6-38
medoid: asm GCA 002308665 1
-
AAI clade 6-39
medoid: asm GCA 002336805 1
-
AAI clade 6-40
medoid: asm GCA 002420145 1
-
AAI clade 6-41
medoid: asm GCA 003557045 1
-
AAI clade 6-42
medoid: asm GCA 002441565 1
-
AAI clade 6-43
medoid: asm GCA 002329125 1
-
AAI clade 6-44
medoid: miga DE18A TARA ANW MAG 00012
-
AAI clade 6-45
medoid: asm GCA 001509335 1
-
AAI clade 6-46
medoid: asm GCA 003332085 1
-
AAI clade 6-47
medoid: asm GCA 002772535 1
-
AAI clade 6-48
medoid: asm GCA 003567775 1
-
AAI clade 6-49
medoid: asm GCA 002344845 1
-
AAI clade 6-50
medoid: miga DE18A TARA MED MAG 00010
-
AAI clade 6-51
medoid: miga DE18A TARA MED MAG 00004
-
AAI clade 6-52
medoid: asm GCA 002323545 1
-
AAI clade 6-53
medoid: asm GCA 002453235 1
-
AAI clade 6-54
medoid: asm GCA 002336185 1
-
AAI clade 6-55
medoid: asm GCA 002455135 1
-
AAI clade 6-56
medoid: asm GCA 002360495 1
-
AAI clade 6-57
medoid: miga DE18A TARA ION MAG 00047
-
AAI clade 6-58
medoid: asm GCA 002483265 1
-
AAI clade 6-59
medoid: gb PMIW00000000
-
AAI clade 6-60
medoid: asm GCA 003731685 1
-
AAI clade 6-61
medoid: asm GCA 002346595 1
-
AAI clade 6-62
medoid: miga PS19A CM madagascar A19 01 1FE bin 27
-
AAI clade 6-63
medoid: miga PS19A CM madagascar A08 01 1FE bin 40
-
AAI clade 6-64
medoid: asm GCA 002314135 1
-
AAI clade 6-65
medoid: asm GCA 002385185 1
-
AAI clade 6-66
medoid: asm GCA 003599275 1
-
AAI clade 6-67
medoid: miga PS19A HMP 2012 SRS015899 bin 21
-
AAI clade 6-68
medoid: asm GCA 002320935 1
-
AAI clade 6-69
medoid: asm GCA 003023045 1
-
AAI clade 6-70
medoid: miga ZQ19A BG 657
-
AAI clade 6-71
medoid: asm GCA 002420705 1
-
AAI clade 6-72
medoid: asm GCA 002418835 1
-
AAI clade 6-73
medoid: asm GCA 003556285 1
-
AAI clade 6-74
medoid: asm GCA 001779875 1
-
AAI clade 6-75
medoid: miga DE18A TARA ANE MAG 00069
-
AAI clade 6-76
medoid: asm GCA 001769035 1
-
AAI clade 6-77
medoid: asm GCA 003560775 1
-
AAI clade 6-78
medoid: miga WD15A P1181 101 23
-
AAI clade 6-79
medoid: asm GCA 001829415 1
-
AAI clade 6-80
medoid: asm GCA 002085205 1
-
AAI clade 6-81
medoid: asm GCA 002030045 1
-
AAI clade 6-82
medoid: asm GCA 003023275 1
-
AAI clade 6-83
medoid: asm GCA 003559015 1
-
AAI clade 6-84
medoid: asm GCA 003553405 1
-
AAI clade 6-85
medoid: asm GCA 003559695 1
-
AAI clade 6-86
medoid: asm GCA 003567355 1
-
AAI clade 6-87
medoid: asm GCA 003567795 1
-
AAI clade 6-88
medoid: asm GCA 003561755 1
-
AAI clade 6-89
medoid: miga DE18A TARA ION MAG 00039
-
AAI clade 6-90
medoid: asm GCA 002457035 1
-
AAI clade 6-91
medoid: asm GCA 003331405 1
-
AAI clade 6-92
medoid: miga SS18B METABAT VerySpecific 339
-
AAI clade 6-93
medoid: miga FB16A E2
-
AAI clade 6-94
medoid: miga DE18A TARA PON MAG 00007
-
AAI clade 6-95
medoid: miga DE18A TARA PSE MAG 00057
-
AAI clade 6-96
medoid: miga DE18A TARA PSE MAG 00068
-
AAI clade 6-97
medoid: miga DE18A TARA PSW MAG 00114
-
AAI clade 6-98
medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES10 bin 40
-
AAI clade 6-99
medoid: miga PS19A BritoIL 2016 M2 52 ST bin 74
-
AAI clade 6-100
medoid: miga PS19A CM periimplantitis SP 323SPI T016 bin 13
-
AAI clade 6-1
medoid: asm GCA 003854975 1
-
AAI clade 7
medoid: asm GCA 003220495 1
-
AAI clade 8
medoid: asm GCA 001768045 1
-
AAI clade 9
medoid: miga ZQ19A BG 239
-
AAI clade 10
medoid: asm GCA 002508675 1
-
AAI clade 11
medoid: miga PU18A 2609459660
-
AAI clade 12
medoid: asm GCA 003662385 1
-
AAI clade 13
medoid: asm GCA 002869845 2
-
AAI clade 14
medoid: miga ZQ19A BG 334
-
AAI clade 15
medoid: miga PS19A CM periimplantitis SP 502SPI T016 bin 11
-
AAI clade 16
medoid: asm GCA 003218215 1
-
AAI clade 17
medoid: gb PMWP00000000
-
AAI clade 18
medoid: miga PS19A FerrettiP 2018 CA C10052MS2906SK t0M15 bin 9
-
AAI clade 19
medoid: miga ZQ19A BG 192
-
AAI clade 20
medoid: asm GCA 003222055 1
-
AAI clade 21
medoid: asm GCA 002304435 1
-
AAI clade 22
medoid: gb PMOA00000000
-
AAI clade 23
medoid: asm GCA 001180165 1
-
AAI clade 24
medoid: asm GCA 900155275 1
-
AAI clade 25
medoid: asm GCA 003562785 1
-
AAI clade 26
medoid: miga PS19A FengQ 2015 SID531281 bin 23
-
AAI clade 27
medoid: miga PS19A XieH 2016 YSZC12003 37277 bin 27
-
AAI clade 28
medoid: miga PS19A CM madagascar A27 02 1FE bin 15
-
AAI clade 29
medoid: asm GCA 900317055 1
-
AAI clade 30
medoid: gb MERW00000000
-
AAI clade 31
medoid: miga PS19A HMP 2012 SRS011126 bin 64
-
AAI clade 32
medoid: asm GCA 002320005 1
-
AAI clade 33
medoid: asm GCA 900318825 1
-
AAI clade 34
medoid: miga BA16A 35 5E
-
AAI clade 35
medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES36 bin 65
-
AAI clade 36
medoid: asm GCA 001604115 1
-
AAI clade 37
medoid: miga SW19B 10676 0045 idba bin 101
-
AAI clade 38
medoid: miga BA16A 35 12A
-
AAI clade 39
medoid: miga SW19B 10678 0025 idba bin 69
-
AAI clade 40
medoid: asm GCA 002372655 1
-
AAI clade 41
medoid: miga ZQ19A BG 670
-
AAI clade 42
medoid: asm GCA 002732585 1
-
AAI clade 43
medoid: gb MFTG00000000
-
AAI clade 44
medoid: asm GCF 000217915 1
-
AAI clade 45
medoid: miga SW19B 10676 0006 idba bin 64
-
AAI clade 46
medoid: asm GCA 005503595 1
-
AAI clade 47
medoid: miga PS19A BritoIL 2016 W1 5 ST bin 1
-
AAI clade 48
medoid: miga PS19A ZellerG 2014 CCIS38765456ST 20 0 bin 96
-
AAI clade 49
medoid: asm GCA 002787475 1
-
AAI clade 50
medoid: asm GCA 002411275 1
-
AAI clade 51
medoid: asm GCA 001003965 1
-
AAI clade 52
medoid: asm GCA 900315795 1
-
AAI clade 53
medoid: asm GCA 002782265 1
-
AAI clade 54
medoid: asm GCA 002506275 1
-
AAI clade 55
medoid: asm GCA 002501805 1
-
AAI clade 56
medoid: miga PS19A HMP 2012 SRS024289 bin 35
-
AAI clade 57
medoid: asm GCA 002362915 1
-
AAI clade 58
medoid: miga PS19A FerrettiP 2018 CA C10031IS2534SA t2M15 bin 2
-
AAI clade 59
medoid: asm GCA 002478295 1
-
AAI clade 60
medoid: miga PS19A HMP 2012 SRS019127 bin 5
-
AAI clade 61
medoid: asm GCA 002373045 1
-
AAI clade 62
medoid: gb PLQF00000000
-
AAI clade 63
medoid: asm GCA 002352835 1
-
AAI clade 64
medoid: miga PS19A FengQ 2015 SID31700 bin 66
-
AAI clade 65
medoid: miga PS19A FerrettiP 2018 CA C10052MS2903SA t0M16 bin 3
-
AAI clade 66
medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES6 bin 23
-
AAI clade 67
medoid: miga SW19B 10678 0003 idba bin 42
-
AAI clade 68
medoid: miga PS19A BritoIL 2016 M1 3 ST bin 29
-
AAI clade 69
medoid: miga PS19A ZeeviD 2015 PNP Main 426 megahit bin 27
-
AAI clade 70
medoid: asm GCA 002369075 1
-
AAI clade 71
medoid: miga SW19B 10675 0017 idba bin 79
-
AAI clade 72
medoid: miga PS19A CM madagascar V53 02 1FE bin 36
-
AAI clade 73
medoid: miga PS19A RampelliS 2015 H1 bin 24
-
AAI clade 74
medoid: miga PS19A HMP 2012 SRS024138 bin 26
-
AAI clade 75
medoid: asm GCA 002294525 1
-
AAI clade 76
medoid: miga PS19A BritoIL 2016 WL 32 ST bin 18
-
AAI clade 77
medoid: miga PS19A LeChatelierE 2013 MH0333 bin 59
-
AAI clade 78
medoid: miga SW19B 10677 0035 idba bin 49
-
AAI clade 79
medoid: miga PS19A XieH 2016 YSZC12003 37293 bin 71
-
AAI clade 80
medoid: miga PS19A ZeeviD 2015 PNP Main 401 megahit bin 4
-
AAI clade 81
medoid: miga PS19A OhJ 2014 MET0095 bin 1
-
AAI clade 82
medoid: miga PS19A BritoIL 2016 M1 59 ST bin 42
-
AAI clade 83
medoid: miga PS19A VincentC 2016 MM027 2 megahit bin 14
-
AAI clade 84
medoid: asm GCA 003020965 1
-
AAI clade 85
medoid: miga PS19A CosteaPI 2017 daisy 11 386 0 bin 19
-
AAI clade 86
medoid: miga PS19A HMP 2012 SRS023595 bin 63
-
AAI clade 87
medoid: asm GCA 001701225 1
-
AAI clade 88
medoid: miga SW19B 10676 0021 idba bin 107
-
AAI clade 89
medoid: miga SW19B 10678 0026 idba bin 16
-
AAI clade 90
medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES2 bin 43
-
AAI clade 91
medoid: miga PS19A VogtmannE 2016 MMRS43563715ST 27 0 0 bin 27
-
AAI clade 92
medoid: miga SW19B 10674 0007 idba bin 173
-
AAI clade 93
medoid: miga PS19A VatanenT 2016 G80490 bin 1