AAI clade 34-8 | MiGA Online

AAI clade 1 medoid: asm GCA 900155255 1

AAI clade 2 medoid: asm GCA 003225555 1

AAI clade 3 medoid: miga PS19A HMP 2012 SRS017439 bin 51

AAI clade 4 medoid: miga BA16A LX33 339

AAI clade 5 medoid: asm GCA 002344625 1

AAI clade 6 medoid: miga ZQ19A BG 240

AAI clade 7 medoid: asm GCA 003220495 1

AAI clade 8 medoid: asm GCA 001768045 1

AAI clade 9 medoid: miga ZQ19A BG 239

AAI clade 10 medoid: asm GCA 002508675 1

AAI clade 11 medoid: miga PU18A 2609459660

AAI clade 12 medoid: asm GCA 003662385 1

AAI clade 13 medoid: asm GCA 002869845 2

AAI clade 14 medoid: miga ZQ19A BG 334

AAI clade 15 medoid: miga PS19A CM periimplantitis SP 502SPI T016 bin 11

AAI clade 16 medoid: asm GCA 003218215 1

AAI clade 17 medoid: gb PMWP00000000

AAI clade 18 medoid: miga PS19A FerrettiP 2018 CA C10052MS2906SK t0M15 bin 9

AAI clade 19 medoid: miga ZQ19A BG 192

AAI clade 20 medoid: asm GCA 003222055 1

AAI clade 21 medoid: asm GCA 002304435 1

AAI clade 22 medoid: gb PMOA00000000

AAI clade 23 medoid: asm GCA 001180165 1

AAI clade 24 medoid: asm GCA 900155275 1

AAI clade 25 medoid: asm GCA 003562785 1

AAI clade 26 medoid: miga PS19A FengQ 2015 SID531281 bin 23

AAI clade 27 medoid: miga PS19A XieH 2016 YSZC12003 37277 bin 27

AAI clade 28 medoid: miga PS19A CM madagascar A27 02 1FE bin 15

AAI clade 29 medoid: asm GCA 900317055 1

AAI clade 30 medoid: gb MERW00000000

AAI clade 31 medoid: miga PS19A HMP 2012 SRS011126 bin 64

AAI clade 32 medoid: asm GCA 002320005 1

AAI clade 33 medoid: asm GCA 900318825 1

AAI clade 34 medoid: miga BA16A 35 5E

AAI clade 34-1 medoid: asm GCA 001604005 1
AAI clade 34-2 medoid: miga PS19A XieH 2016 YSZC12003 37138 bin 67
AAI clade 34-3 medoid: asm GCA 002305955 1
AAI clade 34-4 medoid: asm GCA 900152565 1
AAI clade 34-5 medoid: asm GCA 002435675 1
AAI clade 34-6 medoid: asm GCA 002359915 1
AAI clade 34-7 medoid: asm GCA 002409445 1
AAI clade 34-8 medoid: asm GCA 002299965 1

1 dataset: asm GCA 002299965 1 (AAI: 100.0%)
AAI clade 34-9 medoid: asm GCA 001795415 1
AAI clade 34-10 medoid: asm GCA 002310055 1
AAI clade 34-11 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES17 bin 94
AAI clade 34-12 medoid: miga SW19B 10677 0002 idba bin 62
AAI clade 34-13 medoid: miga PS19A LiuW 2016 SRR3993050 bin 68
AAI clade 34-14 medoid: asm GCA 002305155 1
AAI clade 34-15 medoid: miga PS19A RaymondF 2016 P2E0 bin 75
AAI clade 34-16 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES18 bin 21
AAI clade 34-17 medoid: asm GCA 002438075 1
AAI clade 34-18 medoid: asm GCA 002314595 1
AAI clade 34-19 medoid: miga PS19A CosteaPI 2017 alien2 11 0 0 bin 33
AAI clade 34-20 medoid: asm GCA 002375855 1
AAI clade 34-21 medoid: miga SW19B 10676 min2k bin 3663
AAI clade 34-22 medoid: asm GCA 002405565 1
AAI clade 34-23 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES10 bin 136
AAI clade 34-24 medoid: miga PS19A LeChatelierE 2013 MH0448 bin 60
AAI clade 34-25 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES9 bin 61
AAI clade 34-26 medoid: asm GCA 002315315 1
AAI clade 34-27 medoid: asm GCA 002396645 1
AAI clade 34-28 medoid: asm GCA 001512945 1
AAI clade 34-29 medoid: miga BA16A 35 5E
AAI clade 34-30 medoid: asm GCA 002431635 1
AAI clade 34-31 medoid: miga PS19A Obregon TitoAJ 2015 SM33 bin 35
AAI clade 34-32 medoid: miga SW19B 10676 0017 idba bin 83
AAI clade 34-33 medoid: miga SW19B 10675 0043 idba bin 83
AAI clade 34-34 medoid: miga PS19A LiJ 2014 O2 UC47 1 bin 33
AAI clade 34-35 medoid: miga SW19B 10677 0047 idba bin 22
AAI clade 34-36 medoid: miga SW19B 10674 min2k bin 2843
AAI clade 34-37 medoid: miga PS19A ZellerG 2014 CCIS24254057ST 4 0 bin 56
AAI clade 34-38 medoid: miga PS19A RaymondF 2016 P19E7 bin 33
AAI clade 34-39 medoid: miga SW19B 10677 0030 idba bin 100
AAI clade 34-40 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES21 bin 95
AAI clade 34-41 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES6 bin 124
AAI clade 34-42 medoid: miga PS19A Obregon TitoAJ 2015 NO10 bin 10
AAI clade 34-43 medoid: asm GCA 002371985 1
AAI clade 34-44 medoid: miga PS19A CosteaPI 2017 SID713A004 11 90 0 bin 51
AAI clade 34-45 medoid: asm GCA 002314305 1
AAI clade 34-46 medoid: asm GCA 002490425 1
AAI clade 34-47 medoid: miga PS19A XieH 2016 YSZC12003 37233 bin 91
AAI clade 34-48 medoid: miga PS19A LiJ 2014 V1 UC58 4 bin 44
AAI clade 34-49 medoid: miga SW19B 10677 0029 idba bin 32
AAI clade 34-50 medoid: miga PS19A CosteaPI 2017 SID713B003 11 90 0 bin 40
AAI clade 34-51 medoid: miga PS19A XieH 2016 YSZC12003 36666 bin 64
AAI clade 34-52 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES9 bin 63
AAI clade 34-53 medoid: miga PS19A XieH 2016 YSZC12003 36033 bin 83
AAI clade 34-54 medoid: asm GCA 002366995 1
AAI clade 34-55 medoid: miga PS19A XieH 2016 YSZC12003 36695 bin 67
AAI clade 34-56 medoid: miga PS19A LiJ 2017 H2M614904 bin 35
AAI clade 34-57 medoid: miga PS19A XieH 2016 YSZC12003 35980 bin 38
AAI clade 34-58 medoid: miga SW19B 10677 0017 idba bin 100
AAI clade 34-59 medoid: miga SW19B 10678 min2k bin 140
AAI clade 34-60 medoid: asm GCA 003645735 1
AAI clade 34-61 medoid: miga DE18A TARA RED MAG 00113
AAI clade 34-62 medoid: miga SW19B 10676 0046 idba bin 44
AAI clade 34-63 medoid: miga SW19B 10675 0018 idba bin 25
AAI clade 34-64 medoid: miga PS19A XieH 2016 YSZC12003 37173 bin 53
AAI clade 34-65 medoid: miga SW19B 10676 min2k bin 1744
AAI clade 34-66 medoid: miga SW19B 10674 min2k bin 2794
AAI clade 34-67 medoid: miga SW19B 10677 min2k bin 4437
AAI clade 34-68 medoid: miga PS19A LeChatelierE 2013 MH0197 bin 40
AAI clade 34-69 medoid: miga SW19B 10677 0005 idba bin 52
AAI clade 34-70 medoid: miga PS19A Obregon TitoAJ 2015 SM33 bin 4
AAI clade 34-71 medoid: miga SW19B 10674 0004 idba bin 200
AAI clade 34-72 medoid: miga SW19B 10676 0036 idba bin 147
AAI clade 34-73 medoid: miga SW19B 10677 min2k bin 3364
AAI clade 34-74 medoid: miga SW19B 10677 0034 idba bin 100
AAI clade 34-75 medoid: miga SW19B 10675 0046 idba bin 44
AAI clade 34-76 medoid: miga PS19A HMP 2012 SRS048870 bin 1
AAI clade 34-77 medoid: miga PS19A XieH 2016 YSZC12003 36049 bin 90
AAI clade 34-78 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES11 bin 48
AAI clade 34-79 medoid: miga PS19A HMP 2012 SRS011302 bin 37
AAI clade 34-80 medoid: miga PS19A RaymondF 2016 P23C90 bin 19
AAI clade 34-81 medoid: miga PS19A GeversD 2014 SKBSTL018 bin 28
AAI clade 34-82 medoid: miga PS19A CosteaPI 2017 SID713A004 11 0 0 bin 84
AAI clade 34-83 medoid: miga PS19A XieH 2016 YSZC12003 37102 bin 118
AAI clade 34-84 medoid: miga PS19A CosteaPI 2017 pluto1 11 7 0 bin 37
AAI clade 34-85 medoid: miga PS19A XieH 2016 YSZC12003 37337 bin 28
AAI clade 34-86 medoid: miga PS19A BritoIL 2016 W3 22 ST bin 85
AAI clade 34-87 medoid: miga PS19A LiJ 2017 H3M517925 bin 8
AAI clade 34-88 medoid: miga PS19A VogtmannE 2016 MMRS64281211ST 27 0 0 bin 22
AAI clade 34-89 medoid: miga PS19A VincentC 2016 MM064 1 megahit bin 9
AAI clade 34-90 medoid: miga PS19A LiJ 2017 H2F514923 bin 19
AAI clade 34-91 medoid: miga PS19A RaymondF 2016 P19E7 bin 62
AAI clade 34-92 medoid: miga PS19A XieH 2016 YSZC12003 37097 bin 75
AAI clade 34-93 medoid: miga PS19A LiuW 2016 SRR3993059 bin 6
AAI clade 34-94 medoid: miga PS19A XieH 2016 YSZC12003 36052 bin 91
AAI clade 34-95 medoid: miga PS19A OhJ 2014 MET0119 bin 18
AAI clade 34-96 medoid: miga PS19A QinJ 2012 DOM015 bin 4
AAI clade 34-97 medoid: miga PS19A VincentC 2016 MM002 2 megahit bin 11
AAI clade 34-98 medoid: miga PS19A VincentC 2016 MM058 1 megahit bin 6
AAI clade 34-99 medoid: miga PS19A XieH 2016 YSZC12003 36695 bin 15
AAI clade 34-100 medoid: miga PS19A XieH 2016 YSZC12003 36696 bin 84

AAI clade 35 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES36 bin 65

AAI clade 36 medoid: asm GCA 001604115 1

AAI clade 37 medoid: miga SW19B 10676 0045 idba bin 101

AAI clade 38 medoid: miga BA16A 35 12A

AAI clade 39 medoid: miga SW19B 10678 0025 idba bin 69

AAI clade 40 medoid: asm GCA 002372655 1

AAI clade 41 medoid: miga ZQ19A BG 670

AAI clade 42 medoid: asm GCA 002732585 1

AAI clade 43 medoid: gb MFTG00000000

AAI clade 44 medoid: asm GCF 000217915 1

AAI clade 45 medoid: miga SW19B 10676 0006 idba bin 64

AAI clade 46 medoid: asm GCA 005503595 1

AAI clade 47 medoid: miga PS19A BritoIL 2016 W1 5 ST bin 1

AAI clade 48 medoid: miga PS19A ZellerG 2014 CCIS38765456ST 20 0 bin 96

AAI clade 49 medoid: asm GCA 002787475 1

AAI clade 50 medoid: asm GCA 002411275 1

AAI clade 51 medoid: asm GCA 001003965 1

AAI clade 52 medoid: asm GCA 900315795 1

AAI clade 53 medoid: asm GCA 002782265 1

AAI clade 54 medoid: asm GCA 002506275 1

AAI clade 55 medoid: asm GCA 002501805 1

AAI clade 56 medoid: miga PS19A HMP 2012 SRS024289 bin 35

AAI clade 57 medoid: asm GCA 002362915 1

AAI clade 58 medoid: miga PS19A FerrettiP 2018 CA C10031IS2534SA t2M15 bin 2

AAI clade 59 medoid: asm GCA 002478295 1

AAI clade 60 medoid: miga PS19A HMP 2012 SRS019127 bin 5

AAI clade 61 medoid: asm GCA 002373045 1

AAI clade 62 medoid: gb PLQF00000000

AAI clade 63 medoid: asm GCA 002352835 1

AAI clade 64 medoid: miga PS19A FengQ 2015 SID31700 bin 66

AAI clade 65 medoid: miga PS19A FerrettiP 2018 CA C10052MS2903SA t0M16 bin 3

AAI clade 66 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES6 bin 23

AAI clade 67 medoid: miga SW19B 10678 0003 idba bin 42

AAI clade 68 medoid: miga PS19A BritoIL 2016 M1 3 ST bin 29

AAI clade 69 medoid: miga PS19A ZeeviD 2015 PNP Main 426 megahit bin 27

AAI clade 70 medoid: asm GCA 002369075 1

AAI clade 71 medoid: miga SW19B 10675 0017 idba bin 79

AAI clade 72 medoid: miga PS19A CM madagascar V53 02 1FE bin 36

AAI clade 73 medoid: miga PS19A RampelliS 2015 H1 bin 24

AAI clade 74 medoid: miga PS19A HMP 2012 SRS024138 bin 26

AAI clade 75 medoid: asm GCA 002294525 1

AAI clade 76 medoid: miga PS19A BritoIL 2016 WL 32 ST bin 18

AAI clade 77 medoid: miga PS19A LeChatelierE 2013 MH0333 bin 59

AAI clade 78 medoid: miga SW19B 10677 0035 idba bin 49

AAI clade 79 medoid: miga PS19A XieH 2016 YSZC12003 37293 bin 71

AAI clade 80 medoid: miga PS19A ZeeviD 2015 PNP Main 401 megahit bin 4

AAI clade 81 medoid: miga PS19A OhJ 2014 MET0095 bin 1

AAI clade 82 medoid: miga PS19A BritoIL 2016 M1 59 ST bin 42

AAI clade 83 medoid: miga PS19A VincentC 2016 MM027 2 megahit bin 14

AAI clade 84 medoid: asm GCA 003020965 1

AAI clade 85 medoid: miga PS19A CosteaPI 2017 daisy 11 386 0 bin 19

AAI clade 86 medoid: miga PS19A HMP 2012 SRS023595 bin 63

AAI clade 87 medoid: asm GCA 001701225 1

AAI clade 88 medoid: miga SW19B 10676 0021 idba bin 107

AAI clade 89 medoid: miga SW19B 10678 0026 idba bin 16

AAI clade 90 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES2 bin 43

AAI clade 91 medoid: miga PS19A VogtmannE 2016 MMRS43563715ST 27 0 0 bin 27

AAI clade 92 medoid: miga SW19B 10674 0007 idba bin 173

AAI clade 93 medoid: miga PS19A VatanenT 2016 G80490 bin 1

AAI-based medoid clustering

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