AAI clade 11-7-1-2-30 | MiGA Online

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AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

AAI clade 1 medoid: Rahnella aceris GCF 011684115 1
AAI clade 2 medoid: Sinorhizobium saheli GCF 001651875 1
AAI clade 3 medoid: Oceanobacillus limi GCF 900111445 1
AAI clade 4 medoid: Pseudomonas alcaligenes GCF 900455475 1
AAI clade 5 medoid: Alkalibacterium pelagium GCF 007991315 1
AAI clade 6 medoid: Stenotrophomonas nematodicola GCF 009467805 1
AAI clade 7 medoid: Thermaerobacter marianensis DSM 12885 GCF 000184705 1
AAI clade 8 medoid: Megamonas hypermegale DSM 1672 GCF 000423385 1
AAI clade 9 medoid: Actinomyces gaoshouyii GCF 002072175 1
AAI clade 10 medoid: Micromonospora sagamiensis GCF 014680085 1
AAI clade 11 medoid: Nonomuraea indica GCF 002850745 1
- AAI clade 11-1 medoid: Streptomyces tanashiensis GCF 014648895 1
- AAI clade 11-2 medoid: Kribbella sindirgiensis GCF 004331435 1
- AAI clade 11-3 medoid: Corynebacterium lehmanniae GCF 027570055 1
- AAI clade 11-4 medoid: Streptomyces sabulosicollis GCF 016103465 1
- AAI clade 11-5 medoid: Streptomyces tricolor GCF 002155905 1
- AAI clade 11-6 medoid: Nocardiopsis dassonvillei GCF 900638215 1
- AAI clade 11-7 medoid: Nonomuraea jabiensis GCF 014204795 1
  - AAI clade 11-7-1 medoid: Nonomuraea jabiensis GCF 014204795 1
    
    AAI clade 11-7-1-1 medoid: Streptosporangium roseum DSM 43021 GCF 000024865 1
    
    AAI clade 11-7-1-2 medoid: Nonomuraea jabiensis GCF 014204795 1
    
    AAI clade 11-7-1-2-1 medoid: Nonomuraea cavernae GCF 014646355 1
    
    AAI clade 11-7-1-2-2 medoid: Nonomuraea coxensis DSM 45129 GCF 000379885 1
    
    AAI clade 11-7-1-2-3 medoid: Nonomuraea corallina GCF 027620315 1
    
    AAI clade 11-7-1-2-4 medoid: Nonomuraea glycinis GCF 014646515 1
    
    AAI clade 11-7-1-2-5 medoid: Nonomuraea deserti GCF 004348685 1
    
    AAI clade 11-7-1-2-6 medoid: Nonomuraea phyllanthi GCF 006334985 2
    
    AAI clade 11-7-1-2-7 medoid: Frankia canadensis GCF 900197875 1
    
    AAI clade 11-7-1-2-8 medoid: Modestobacter caceresii GCF 000761485 1
    
    AAI clade 11-7-1-2-9 medoid: Nonomuraea dietziae GCF 014195505 1
    
    AAI clade 11-7-1-2-10 medoid: Nonomuraea angiospora GCF 014873145 1
    
    AAI clade 11-7-1-2-11 medoid: Nonomuraea antri GCF 013283785 1
    
    AAI clade 11-7-1-2-12 medoid: Nonomuraea aridisoli GCF 003236395 1
    
    AAI clade 11-7-1-2-13 medoid: Nonomuraea guangzhouensis GCF 019396345 1
    
    AAI clade 11-7-1-2-14 medoid: Nonomuraea basaltis GCF 005893125 1
    
    AAI clade 11-7-1-2-15 medoid: Actinomadura parvosata subsp. kistnae GCF 002057455 1
    
    AAI clade 11-7-1-2-16 medoid: Nonomuraea ceibae GCF 019396325 1
    
    AAI clade 11-7-1-2-17 medoid: Nonomuraea cypriaca GCF 015645445 1
    
    AAI clade 11-7-1-2-18 medoid: Nonomuraea endophytica GCF 014203235 1
    
    AAI clade 11-7-1-2-19 medoid: Nonomuraea fuscirosea GCF 003001935 1
    
    AAI clade 11-7-1-2-20 medoid: Nonomuraea muscovyensis GCF 014207745 1
    
    AAI clade 11-7-1-2-21 medoid: Nonomuraea lactucae GCF 003313395 1
    
    AAI clade 11-7-1-2-22 medoid: Nonomuraea maritima GCF 900100395 1
    
    AAI clade 11-7-1-2-23 medoid: Nonomuraea roseoviolacea subsp. carminata GCF 024172185 1
    
    AAI clade 11-7-1-2-24 medoid: Nonomuraea pusilla GCF 900109355 1
    
    AAI clade 11-7-1-2-25 medoid: Nonomuraea rhizosphaerae GCF 019396405 1
    
    AAI clade 11-7-1-2-26 medoid: Nonomuraea sediminis GCF 018531495 1
    
    AAI clade 11-7-1-2-27 medoid: Nonomuraea solani GCF 900108335 1
    
    AAI clade 11-7-1-2-28 medoid: Nonomuraea soli GCF 013761175 1
    
    AAI clade 11-7-1-2-29 medoid: Nonomuraea spiralis GCF 014648435 1
    
    AAI clade 11-7-1-2-30 medoid: Nonomuraea typhae GCF 009760925 1
    
    1 dataset: Nonomuraea typhae GCF 009760925 1 (AAI: 100.0%)
    
    AAI clade 11-7-1-2-31 medoid: Nonomuraea zeae GCF 005889725 1
    
    AAI clade 11-7-1-2-32 medoid: Spongiactinospora gelatinilytica GCF 003236385 1
    
    AAI clade 11-7-1-2-33 medoid: Thermoactinospora rubra GCF 002093975 1
    
    AAI clade 11-7-1-2-34 medoid: Thermostaphylospora chromogena GCF 900099985 1
    
    AAI clade 11-7-1-2-35 medoid: Poriferisocius aerobius asm GCA 028278955 1
    
    AAI clade 11-7-1-2-36 medoid: Poriferisocius anaerobius asm GCA 028278785 1
    
    AAI clade 11-7-1-3 medoid: Patulibacter brassicae GCF 033949425 1
  - AAI clade 11-7-2 medoid: Microbispora siamensis GCF 016863095 1
- AAI clade 11-8 medoid: Nocardioides pinisoli GCF 024199985 1
- AAI clade 11-9 medoid: Actinomadura citrea GCF 013409045 1
AAI clade 12 medoid: Jiella avicenniae GCF 021390325 1
AAI clade 13 medoid: Chitinophaga terrae ex Kim and Jung 2007 GCF 900107795 1
AAI clade 14 medoid: Zeimonas arvi GCF 008039575 1
AAI clade 15 medoid: Cognatiyoonia koreensis GCF 900109295 1
AAI clade 16 medoid: Legionella beliardensis GCF 900452395 1
AAI clade 17 medoid: Dorea hominis GCF 014287705 1
AAI clade 18 medoid: Massilia putida GCF 001941825 1
AAI clade 19 medoid: Phycicoccus avicenniae GCF 018139485 1
AAI clade 20 medoid: Lelliottia steviae GCF 015209785 1
AAI clade 21 medoid: Natrarchaeobaculum aegyptiacum GCF 002156705 1
AAI clade 22 medoid: Aquifex aeolicus VF5 GCF 000008625 1
AAI clade 23 medoid: Campylobacter showae GCF 004803815 1
AAI clade 24 medoid: Mannheimia bovis GCF 014541205 1
AAI clade 25 medoid: Solobacterium moorei DSM 22971 GCF 000425005 1
AAI clade 26 medoid: Neptunicella marina GCF 014270035 1
AAI clade 27 medoid: Sphingomonas sabuli GCF 014352855 1
AAI clade 28 medoid: Luteolibacter marinus GCF 014904755 1
AAI clade 29 medoid: Mycoplasmoides genitalium GCF 036689675 1
AAI clade 30 medoid: Brevundimonas huaxiensis GCF 014218725 1
AAI clade 31 medoid: Lysobacter spongiicola DSM 21749 GCF 900167055 1
AAI clade 32 medoid: Glycomyces dulcitolivorans GCF 003265355 1
AAI clade 33 medoid: Methylovulum miyakonense HT12 GCF 000384075 1
AAI clade 34 medoid: Candidatus Fiminaster equi GCA 018064745 1

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