JSON
See as table

Genetics

Publications
355

Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea

Citation
Borrel et al. (2019). Nature Microbiology 4 (4)
Names
“Methanoliparia” “Methanoliparum thermophilum” “Methanoliparaceae” “Methanoliparum” “Methanoliparales”
Abstract

Integrated Omic Analyses Provide Evidence that a “ Candidatus Accumulibacter phosphatis” Strain Performs Denitrification under Microaerobic Conditions

Citation
Camejo et al. (2019). mSystems 4 (1)
Names
“Accumulibacter phosphatis”
Abstract
“ Candidatus Accumulibacter phosphatis” is widely found in full-scale wastewater treatment plants, where it has been identified as the key organism for biological removal of phosphorus. Since aeration can account for 50% of the energy use during wastewater treatment, microaerobic conditions for wastewater treatment have emerged as a cost-effective alternative to conventional biological nutrient removal processes. Our report provides strong genomics-based evid

‘Candidatus Viridilinea mediisalina’, a novel phototrophic Chloroflexi bacterium from a Siberian soda lake

Citation
Gaisin et al. (2019). FEMS Microbiology Letters 366 (5)
Names
Ca. Viridilinea mediisalina
Abstract

Proteomic and metabolomic analyses provide insight into the off-flavour of fruits from citrus trees infected with ‘Candidatus Liberibacter asiaticus’

Citation
Yao et al. (2019). Horticulture Research 6 (1)
Names
Ca. Liberibacter asiaticus
Abstract

Genome Sequence of “ Candidatus Viridilinea halotolerans” Chok-6, Isolated from a Saline Sulfide-Rich Spring

Citation
Grouzdev et al. (2019). Microbiology Resource Announcements 8 (4)
Names
Ca. Viridilinea halotolerans
Abstract
The draft genome sequence of the green filamentous anoxygenic phototrophic (FAP) bacterium “ Candidatus Viridilinea halotolerans” strain Chok-6, isolated from a cold saline sulfide-rich spring near Lake Chokrak, is presented. The genome sequence is annotated for elucidation of the taxonomic position of Chok-6 and to extend the public genome database.

Draft Whole-Genome Sequence of a “ Candidatus Liberibacter asiaticus” Strain from Yunnan, China

Citation
Chen et al. (2019). Microbiology Resource Announcements 8 (3)
Names
Ca. Liberibacter asiaticus
Abstract
The draft genome sequence of “ Candidatus Liberibacter asiaticus” strain YNJS7C, isolated from a navel orange tree in Yunnan Province, China, is presented here. The YNJS7C strain has a genome size of 1,258,986 bp, with a G+C content of 36.6%, 1,174 predicted open reading frames, and 53 RNA genes.

Draft Genome Sequence of “ Candidatus Sulcia muelleri” Strain KPTW1 from Kolla paulula , a Vector of Xylella fastidiosa Causing Pierce’s Disease of Grapevine in Taiwan

Citation
Shih et al. (2019). Microbiology Resource Announcements 8 (2)
Names
Ca. Sulcia muelleri
Abstract
The genome of “ Candidatus Sulcia muelleri” strain KPTW1 from Kolla paulula , a vector of Xylella fastidiosa that causes Pierce’s disease (PD) of grapevine in Taiwan, was sequenced. The strain has a genome size of 253,942 bp, GC content of 22.7%, 237 predicted protein-coding genes, and 34 RNA genes.

Whether Dirofilaria repens parasites from South India belong to zoonotic Candidatus Dirofilaria hongkongensis (Dirofilaria sp. hongkongensis)?

Citation
Pradeep et al. (2019). Infection, Genetics and Evolution 67
Names
Ca. Dirofilaria hongkongensis
Abstract

GABA-modulating bacteria of the human gut microbiota

Citation
Strandwitz et al. (2018). Nature Microbiology 4 (3)
Names
“Evtepia gabavorous” “Evtepia”
Abstract

Draft Genome Sequence of “ Candidatus Spirobacillus cienkowskii,” a Pathogen of Freshwater Daphnia Species, Reconstructed from Hemolymph Metagenomic Reads

Citation
Bresciani et al. (2018). Microbiology Resource Announcements 7 (22)
Names
“Spirobacillus cienkowskii”
Abstract
We report here the near-complete genome sequence of “ Candidatus Spirobacillus cienkowskii,” a spiral-shaped, red-pigmented uncultivated bacterial pathogen of Daphnia spp. The genome is 2.74 Mbp in size, has a GC content of 32.1%, and contains genes associated with bacterial motility and the production of carotenoids, which could explain the distinctive red color of hosts infected with this pathogen.