Intestinicoccus colisanansTs


Citation

Formal styling
Intestinicoccus colisanansTs Zhou et al., 2023
Effective publication
Zhou et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:tpd6ryk0 (validated)
Cannonical URL
https://seqco.de/i:32228

Nomenclature

Rank
Species
Syllabication
co.li.sa'nans
Etymology
L. neut. n. colon, great gut, colon; L. part. adj. sanans, healing; N.L. part. adj. colisanans, colon-healing
Nomenclatural type
NCBI Assembly: GCA_021029595.1
Reference strain
MH27-2
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Intestinicoccus colisanans strain MH27-2 was recovered from faeces collected from a healthy human donor. The strain formed raised creamy white/milky colonies with an entire margin on agar and was observed as Gram-variable coccoid/ovoid cells that were often present as pairs or short chains. The gene repertoire of Intestinicoccus colisanans indicate it is likely a saccharolytic gut bacterium.
Classification
Bacteria » Bacillota » Clostridia » “Oscillospirales” » “Acutalibacteraceae” » Intestinicoccus » Intestinicoccus colisanansTs
Parent
Intestinicoccus
Alternative placements
Taxonomic status
Synonym
Correct name
Hominenteromicrobium mulierisT

Genomics

Accession
NCBI Assembly:GCA_021029595.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.66%
  • Contamination: 0.0%
  • Quality: 98.66
Ribosomal and transfer RNA genes
  • 3 16S rRNAs (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
312.9 ×
Source
Other features
  • G+C Content: 52.55%
  • Coding Density: 88.15%
  • Codon Table: 11
  • N50: 454,909 bp
  • Contigs: 25
  • Largest Contig: 747,301 bp
  • Assembly Length: 2,969,717 bp
  • Ambiguous Assembly Fraction: 0.0002%
Submitter comments
Completeness and contaminated were evaluated by CheckM v1.0.18.
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Chuvochina, Maria 6 months ago
Submitted by
Chuvochina, Maria 6 months ago
Curators
Endorsed by
Palmer, Marike 3 months ago
Validated by
Palmer, Marike 3 months ago

Publications
1

Citation Title
Zhou et al., 2023, BMC Research Notes Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans
Effective publication



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