Intestinicoccus colisanans^Ts

Citation

Formal styling

Intestinicoccus colisanans^Ts Zhou et al., 2023

Effective publication

Zhou et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:tpd6ryk0 (validated)

Cannonical URL

https://seqco.de/i:32228

Nomenclature

Rank

Species

Syllabication

co.li.sa'nans

Etymology

L. neut. n. colon, great gut, colon; L. part. adj. sanans, healing; N.L. part. adj. colisanans, colon-healing

Nomenclatural type

NCBI Assembly: GCA_021029595.1

Reference strain

MH27-2

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Intestinicoccus colisanans strain MH27-2 was recovered from faeces collected from a healthy human donor. The strain formed raised creamy white/milky colonies with an entire margin on agar and was observed as Gram-variable coccoid/ovoid cells that were often present as pairs or short chains. The gene repertoire of Intestinicoccus colisanans indicate it is likely a saccharolytic gut bacterium.

Classification

Bacteria » Bacillota » Clostridia » “Oscillospirales” » “Acutalibacteraceae” » Intestinicoccus » Intestinicoccus colisanans^Ts

Parent

Intestinicoccus

Alternative placements

• Hominenteromicrobium

Taxonomic status

Synonym

Correct name

Hominenteromicrobium mulieris^T

Genomics

Accession

NCBI Assembly:GCA_021029595.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 98.66%
• Contamination: 0.0%
• Quality: 98.66

Ribosomal and transfer RNA genes

• 3 16S rRNAs (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

312.9 ×

Source

• BioSample: SRS11093157

Other features

• G+C Content: 52.55%
• Coding Density: 88.15%
• Codon Table: 11
• N50: 454,909 bp
• Contigs: 25
• Largest Contig: 747,301 bp
• Assembly Length: 2,969,717 bp
• Ambiguous Assembly Fraction: 0.0002%

Submitter comments

Completeness and contaminated were evaluated by CheckM v1.0.18.

Automated checks

Complete

See additional details

Metadata

Outside links and data sources

• GTDB Genome: GCA_021029595.1

Search sequences

• NCBI Nucleotide

Local history

• This name was last modified 3 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Chuvochina, Maria 7 months ago

Submitted by

Chuvochina, Maria 7 months ago

Curators

• Rodriguez-R, Luis M
• Palmer, Marike (nomenclature)

Endorsed by

Palmer, Marike 3 months ago

Validated by

Palmer, Marike 3 months ago