JSON

Genome sc|0000934

Name

Intestinicoccus colisanansTs

Database

NCBI Assembly

Accession

GCA_021029595.1

Genomics

Accession
NCBI Assembly:GCA_021029595.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.66%
  • Contamination: 0.0%
  • Quality: 98.66
Ribosomal and transfer RNA genes
  • 3 16S rRNAs (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
312.9 ×
Source
Other features
  • G+C Content: 52.55%
  • Coding Density: 88.15%
  • Codon Table: 11
  • N50: 454,909 bp
  • Contigs: 25
  • Largest Contig: 747,301 bp
  • Assembly Length: 2,969,717 bp
  • Ambiguous Assembly Fraction: 0.0002%
Submitter comments
Completeness and contaminated were evaluated by CheckM v1.0.18.
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2020-01-14
Location
Lat Lon: 27.4705 S 153.0260 E
Toponym
Geo Loc Name: Australia: Brisbane
Environment
Sample Type: pure culture
Isolation Source: feces
Env Broad Scale: organic material [ENVO:01000155]
Env Local Scale: excreta material [ENVO:02000022]
Env Medium: fecal material [ENVO:00002003]
Other
Host: Homo sapiens
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 4 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license