JSONPDF

Nucleicultrix amoebiphilaTs

Citation

Formal styling
Nucleicultrix amoebiphilaTs Schulz et al., 2014 (valid 2023)
Proposed by
Schulz et al., 2014
Status
Valid (SeqCode)
Register List
seqco.de/r:q5gjvsma (validated)
Cannonical URL
https://seqco.de/i:31953

Nomenclature

Rank
Species
Syllabication
a.moe.bi'phi.la
Etymology
N.L. fem. n. amoeba, an amoeba; N.L. fem. adj. suff. -phila, friend, loving; N.L. fem. adj. amoebiphila, amoeba-loving
Nomenclatural type
NCBI Assembly: GCA_002117145.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The description is the same as given by (Schulz et al., 2014). Briefly, the organism is a intranuclear symbiont of amoebae (Hartmannella sp.) with coccoid-shaped cells with a length of 0.5–1 μm, a diameter of 0.3–0.4 μm and a Gram-negative-type cell wall.  
Notes
Intranuclear symbiont of Hartmannella sp. host
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » “Caedimonadales” » “Nucleicultricaceae” » Nucleicultrix » Nucleicultrix amoebiphilaTs
Parent
Nucleicultrix

Genomics

Accession
NCBI Assembly: GCA_002117145.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.55%
  • Contamination: 0.2%
  • Quality: 95.55
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
1700.0 ×
Source
Other features
  • G+C Content: 39.72%
  • Coding Density: 90.38%
  • Codon Table: 11
  • N50: 1,838,212 bp
  • Contigs: 1
  • Assembly Length: 1,838,212 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
checkM2
Automated checks
Complete

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Masha 5 months ago
Submitted by
Masha 5 months ago
Endorsed by
MarikePalmer 4 months ago
Validated by
miguel 4 months ago

Publications (1)

Citation Title
Schulz et al., 2014, The ISME Journal Life in an unusual intracellular niche: a bacterial symbiont infecting the nucleus of amoebae
Proposed this name


© 2022-2023 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license