Ruminococcus primiciens

Citation

Formal styling

Ruminococcus primiciens corrig. Moraïs et al., 2024

Effective publication

Moraïs et al., 2024

Corrigendum

In SeqCode Registry from “Ruminococcus primaciens” (sic)

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:636yhucc (validated)

Cannonical URL

https://seqco.de/i:23986

Nomenclature

Rank

Species

Syllabication

pri.mi.ci'ens

Etymology

L. masc. adj. primus, the first; L. pres. part. ciens, rousing; N.L. part. adj. primiciens, the first to rise, a likely ancestor species

Nomenclatural type

NCBI Assembly: GCA_037465745.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Monkey and human gut bacteria

Classification

Bacteria » Bacillota » Clostridia » Eubacteriales » Oscillospiraceae » Ruminococcus » Ruminococcus primiciens

Parent

Ruminococcus

Genomics

Accession

NCBI Assembly:GCA_037465745.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 92.95%
• Contamination: 2.46%
• Quality: 80.65

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 14 amino acids

Sequencing depth

92.95 ×

Source

• BioSample: SAMN37643305

Other features

• G+C Content: 37.5%
• Coding Density: 87.48%
• Codon Table: 11
• N50: 23,482 bp
• Contigs: 128
• Largest Contig: 61,525 bp
• Assembly Length: 2,023,970 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

Metadata

Outside links and data sources

• GTDB Genome: GCA_037465745.1

Search sequences

• NCBI Nucleotide

Local history

• This name was last modified 9 days ago
• Submission process status
• Quality checks before valid publication

Registered by

Morais, Sarah over 1 year ago

Submitted by

Morais, Sarah about 1 month ago

Curators

• Rodriguez-R, Luis M
• Palmer, Marike (nomenclature)
• Valero Tebar, Juan (genomics)

Validated by

Palmer, Marike 9 days ago