JSON

Genome sc|0000445

Name

Hepatobacter penaeiTs

Database

NCBI Assembly

Accession

GCA_000742475.1

Genomics

Accession
NCBI Assembly:GCA_000742475.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 91.94%
  • Contamination: 0.0%
  • Quality: 91.94
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
927.0 ×
Source
Other features
  • G+C Content: 49.75%
  • Coding Density: 89.38%
  • Codon Table: 11
  • N50: 334,235 bp
  • Contigs: 5
  • Largest Contig: 376,171 bp
  • Assembly Length: 1,115,609 bp
  • Ambiguous Assembly Fraction: 0.083%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2012
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Host: Penaeus vannamei
Package
Ncbi Submission Package: MIGS.ba.host-associated.5.0
Biosamplemodel: MIGS/MIMS/MIMARKS.host-associated
All retrieved samples
Metadata retrieved 4 months ago


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