JSON

Genome sc|0001492

Name

Shikimatogenerans bostrichidophilus

Database

NCBI Assembly

Accession

GCA_029851105.1

Genomics

Accession
NCBI Assembly:GCA_029851105.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
242.0 ×
Source
Other features
  • G+C Content: 13.5%
  • Coding Density: 91.04%
  • Codon Table: 11
  • N50: 177,918 bp
  • Contigs: 1
  • Largest Contig: 177,918 bp
  • Assembly Length: 177,918 bp
  • Ambiguous Assembly Fraction: 0.065%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2014
Location
Not detected
Toponym
Geo Loc Name: Germany: Berlin
Environment
Sample Type: metagenomic assembly
Isolation Source: beetle abdomen
Other
Host: Dinoderus porcellus
Package
Ncbi Submission Package: MIMAG.6.0
Biosamplemodel: MIMAG
Additional Accessions
SAMN28175366
All retrieved samples
Metadata retrieved 3 months ago


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