AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 6-1
medoid: GCF 000336775 1
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AAI clade 6-2
medoid: GCA 013153105 1
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AAI clade 6-2-1
medoid: GCA 001189275 1
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AAI clade 6-2-2
medoid: GCA 000016605 1
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AAI clade 6-2-3
medoid: GCA 015662595 1
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AAI clade 6-2-4
medoid: GCF 009729055 1
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AAI clade 6-2-5
medoid: GCF 000144915 1
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AAI clade 6-2-6
medoid: GCA 000508305 1
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AAI clade 6-2-7
medoid: GCF 009729015 1
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AAI clade 6-2-8
medoid: GCF 000193375 1
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AAI clade 6-2-9
medoid: GCF 000148385 1
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AAI clade 6-2-10
medoid: GCA 002508315 1
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AAI clade 6-2-11
medoid: GCA 003649515 1
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AAI clade 6-2-12
medoid: GCF 000015945 1
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AAI clade 6-2-13
medoid: GCA 015661855 1
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AAI clade 6-2-14
medoid: GCA 013154355 1
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AAI clade 6-2-15
medoid: GCA 003661745 1
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AAI clade 6-2-16
medoid: GCF 000186365 1
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AAI clade 6-2-17
medoid: GCF 008326425 1
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AAI clade 6-2-18
medoid: GCF 000018305 1
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AAI clade 6-2-19
medoid: GCF 000317795 1
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AAI clade 6-2-20
medoid: GCA 011055275 1
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AAI clade 6-2-21
medoid: GCA 002728275 1
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AAI clade 6-2-22
medoid: GCA 002855745 1
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AAI clade 6-2-23
medoid: GCA 002899805 1
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AAI clade 6-2-24
medoid: GCA 003019535 1
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AAI clade 6-2-25
medoid: GCA 003086555 1
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AAI clade 6-2-26
medoid: GCA 003116855 1
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AAI clade 6-2-27
medoid: GCA 015521385 1
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AAI clade 6-2-28
medoid: GCA 003649205 1
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AAI clade 6-2-29
medoid: GCA 003650815 1
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AAI clade 6-2-30
medoid: GCA 003649495 1
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AAI clade 6-2-31
medoid: GCA 003649565 1
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AAI clade 6-2-32
medoid: GCA 003649665 1
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AAI clade 6-2-33
medoid: GCF 001412615 1
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AAI clade 6-2-33-1
medoid: GCA 003978665 1
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AAI clade 6-2-33-2
medoid: GCF 001412615 1
6 datasets: GCA 013153105 1 (AAI: 59.22%), GCA 013540595 1 (AAI: 56.07%), GCA 015661645 1 (AAI: 70.0%), GCF 000015145 1 (AAI: 60.01%), GCF 001412615 1 (AAI: 100.0%), and GCF 001462395 1 (AAI: 63.71%)
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AAI clade 6-2-33-3
medoid: GCA 013153145 1
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AAI clade 6-2-33-4
medoid: GCA 015662475 1
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AAI clade 6-2-33-1
medoid: GCA 003978665 1
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AAI clade 6-2-34
medoid: GCA 013152575 1
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AAI clade 6-2-35
medoid: GCF 000017945 1
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AAI clade 6-2-36
medoid: GCA 013154205 1
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AAI clade 6-2-37
medoid: GCA 015521185 1
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AAI clade 6-2-38
medoid: GCA 015520265 1
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AAI clade 6-2-39
medoid: GCA 015521195 1
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AAI clade 6-2-40
medoid: GCA 015522645 1
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AAI clade 6-2-41
medoid: GCF 000011125 1
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AAI clade 6-2-42
medoid: GCA 015521775 1
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AAI clade 6-2-43
medoid: GCA 015523575 1
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AAI clade 6-2-44
medoid: GCA 017857195 1
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AAI clade 6-2-45
medoid: GCA 017857595 1
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AAI clade 6-2-46
medoid: GCF 019175345 1
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AAI clade 6-2-47
medoid: GCF 000092185 1
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AAI clade 6-2-1
medoid: GCA 001189275 1
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AAI clade 6-3
medoid: GCF 000223905 1
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AAI clade 6-4
medoid: GCA 012798025 1
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AAI clade 6-5
medoid: GCF 006740685 1
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AAI clade 6-6
medoid: GCA 017935945 1
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AAI clade 6-7
medoid: GCA 000690595 2
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AAI clade 6-8
medoid: GCF 018228765 1
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AAI clade 6-9
medoid: GCA 015521605 1
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AAI clade 6-10
medoid: GCA 002506275 1
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AAI clade 6-11
medoid: GCA 018396875 1
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AAI clade 6-12
medoid: GCF 000969905 1
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AAI clade 6-13
medoid: GCA 002067325 1
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AAI clade 6-14
medoid: GCA 002762865 1
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AAI clade 6-15
medoid: GCF 000025525 1
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AAI clade 6-16
medoid: GCF 000025505 1
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AAI clade 6-17
medoid: GCA 017608985 1
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AAI clade 6-18
medoid: GCA 005878985 1
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AAI clade 6-19
medoid: GCF 001017125 1
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AAI clade 6-20
medoid: GCA 016840855 1
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AAI clade 6-21
medoid: GCA 902560445 1
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AAI clade 6-22
medoid: GCA 005881695 1
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AAI clade 6-23
medoid: GCA 005222975 1
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AAI clade 6-24
medoid: GCF 007826885 1
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AAI clade 6-25
medoid: GCA 902784195 1
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AAI clade 6-26
medoid: GCA 015062915 1
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AAI clade 6-1
medoid: GCF 000336775 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1