AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
    • AAI clade 5-1 medoid: GCA 017449415 1
    • AAI clade 5-2 medoid: GCF 000381045 1
    • AAI clade 5-3 medoid: GCF 015206895 1
    • AAI clade 5-4 medoid: GCA 003280985 1
    • AAI clade 5-5 medoid: GCF 900142025 1
    • AAI clade 5-6 medoid: GCF 014205895 1
    • AAI clade 5-7 medoid: GCA 002747175 1
    • AAI clade 5-8 medoid: GCF 002532075 1
    • AAI clade 5-9 medoid: GCA 016179875 1
    • AAI clade 5-10 medoid: GCA 002869845 2
    • AAI clade 5-11 medoid: GCA 016235875 1
    • AAI clade 5-12 medoid: GCA 905612265 1
    • AAI clade 5-13 medoid: GCF 014201315 1
    • AAI clade 5-14 medoid: GCA 003167255 1
    • AAI clade 5-15 medoid: GCA 013152765 1
    • AAI clade 5-16 medoid: GCA 009845545 1
    • AAI clade 5-17 medoid: GCF 003003925 1
    • AAI clade 5-18 medoid: GCA 016182975 1
    • AAI clade 5-19 medoid: GCA 015484715 1
    • AAI clade 5-20 medoid: GCA 017510075 1
    • AAI clade 5-21 medoid: GCA 015222205 1
      • AAI clade 5-21-1 medoid: GCA 005882985 1
      • AAI clade 5-21-2 medoid: GCA 003229915 1
      • AAI clade 5-21-3 medoid: GCA 001796525 1
      • AAI clade 5-21-4 medoid: GCA 017885485 1
      • AAI clade 5-21-5 medoid: GCA 011191975 1
      • AAI clade 5-21-6 medoid: GCA 016190485 1
      • AAI clade 5-21-7 medoid: GCA 002772325 1
      • AAI clade 5-21-8 medoid: GCA 016865855 1
      • AAI clade 5-21-9 medoid: GCA 016783105 1
      • AAI clade 5-21-10 medoid: GCA 002816455 1
        • AAI clade 5-21-10-1 medoid: GCA 002238505 1
        • AAI clade 5-21-10-2 medoid: GCA 002816455 1
          4 datasets: GCA 002311385 1 (AAI: 67.46%), GCA 002816455 1 (AAI: 100.0%), GCA 002816875 1 (AAI: 56.03%), and GCA 002817055 1 (AAI: 67.19%)
        • AAI clade 5-21-10-3 medoid: GCA 009391275 1
        • AAI clade 5-21-10-4 medoid: GCA 009692925 1
      • AAI clade 5-21-11 medoid: GCA 009840165 1
      • AAI clade 5-21-12 medoid: GCA 002238855 1
      • AAI clade 5-21-13 medoid: GCA 003142375 1
      • AAI clade 5-21-14 medoid: GCA 016210285 1
      • AAI clade 5-21-15 medoid: GCA 009392095 1
      • AAI clade 5-21-16 medoid: GCA 016193545 1
      • AAI clade 5-21-17 medoid: GCA 014859165 1
      • AAI clade 5-21-18 medoid: GCA 004376105 1
      • AAI clade 5-21-19 medoid: GCA 002710215 1
      • AAI clade 5-21-20 medoid: GCA 002421585 1
      • AAI clade 5-21-21 medoid: GCA 009841045 1
      • AAI clade 5-21-22 medoid: GCA 002699165 1
      • AAI clade 5-21-23 medoid: GCA 002699485 1
      • AAI clade 5-21-24 medoid: GCA 002716405 1
      • AAI clade 5-21-25 medoid: GCA 002718395 1
      • AAI clade 5-21-26 medoid: GCA 009391195 1
      • AAI clade 5-21-27 medoid: GCA 016210515 1
      • AAI clade 5-21-28 medoid: GCA 008373165 1
      • AAI clade 5-21-29 medoid: GCA 003104995 1
      • AAI clade 5-21-30 medoid: GCA 903916765 1
      • AAI clade 5-21-31 medoid: GCA 016179765 1
      • AAI clade 5-21-32 medoid: GCA 003562555 1
      • AAI clade 5-21-33 medoid: GCA 004377135 1
      • AAI clade 5-21-34 medoid: GCA 009784845 1
      • AAI clade 5-21-35 medoid: GCA 016189845 1
      • AAI clade 5-21-36 medoid: GCA 011170375 1
      • AAI clade 5-21-37 medoid: GCA 018725425 1
      • AAI clade 5-21-38 medoid: GCA 014239685 1
      • AAI clade 5-21-39 medoid: GCF 001953175 1
    • AAI clade 5-22 medoid: GCA 013813355 1
    • AAI clade 5-23 medoid: GCA 016706275 1
    • AAI clade 5-24 medoid: GCA 003554615 1
    • AAI clade 5-25 medoid: GCA 003448875 1
    • AAI clade 5-26 medoid: GCA 017622235 1
    • AAI clade 5-27 medoid: GCA 001919715 1
    • AAI clade 5-28 medoid: GCA 017883385 1
    • AAI clade 5-29 medoid: GCA 001805765 1
    • AAI clade 5-30 medoid: GCF 002251945 1
    • AAI clade 5-31 medoid: GCA 005888435 1
    • AAI clade 5-32 medoid: GCA 003222055 1
    • AAI clade 5-33 medoid: GCA 005889085 1
    • AAI clade 5-34 medoid: GCA 016741895 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1