AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 5-1
medoid: GCA 017449415 1
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AAI clade 5-2
medoid: GCF 000381045 1
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AAI clade 5-3
medoid: GCF 015206895 1
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AAI clade 5-4
medoid: GCA 003280985 1
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AAI clade 5-5
medoid: GCF 900142025 1
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AAI clade 5-6
medoid: GCF 014205895 1
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AAI clade 5-7
medoid: GCA 002747175 1
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AAI clade 5-8
medoid: GCF 002532075 1
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AAI clade 5-9
medoid: GCA 016179875 1
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AAI clade 5-10
medoid: GCA 002869845 2
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AAI clade 5-11
medoid: GCA 016235875 1
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AAI clade 5-12
medoid: GCA 905612265 1
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AAI clade 5-13
medoid: GCF 014201315 1
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AAI clade 5-14
medoid: GCA 003167255 1
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AAI clade 5-15
medoid: GCA 013152765 1
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AAI clade 5-16
medoid: GCA 009845545 1
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AAI clade 5-17
medoid: GCF 003003925 1
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AAI clade 5-18
medoid: GCA 016182975 1
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AAI clade 5-19
medoid: GCA 015484715 1
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AAI clade 5-20
medoid: GCA 017510075 1
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AAI clade 5-21
medoid: GCA 015222205 1
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AAI clade 5-21-1
medoid: GCA 005882985 1
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AAI clade 5-21-2
medoid: GCA 003229915 1
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AAI clade 5-21-3
medoid: GCA 001796525 1
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AAI clade 5-21-4
medoid: GCA 017885485 1
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AAI clade 5-21-5
medoid: GCA 011191975 1
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AAI clade 5-21-6
medoid: GCA 016190485 1
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AAI clade 5-21-7
medoid: GCA 002772325 1
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AAI clade 5-21-8
medoid: GCA 016865855 1
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AAI clade 5-21-9
medoid: GCA 016783105 1
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AAI clade 5-21-10
medoid: GCA 002816455 1
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AAI clade 5-21-11
medoid: GCA 009840165 1
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AAI clade 5-21-12
medoid: GCA 002238855 1
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AAI clade 5-21-13
medoid: GCA 003142375 1
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AAI clade 5-21-14
medoid: GCA 016210285 1
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AAI clade 5-21-15
medoid: GCA 009392095 1
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AAI clade 5-21-16
medoid: GCA 016193545 1
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AAI clade 5-21-17
medoid: GCA 014859165 1
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AAI clade 5-21-18
medoid: GCA 004376105 1
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AAI clade 5-21-19
medoid: GCA 002710215 1
3 datasets: GCA 002401285 1 (AAI: 74.85%), GCA 002708395 1 (AAI: 65.86%), and GCA 002710215 1 (AAI: 100.0%)
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AAI clade 5-21-20
medoid: GCA 002421585 1
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AAI clade 5-21-21
medoid: GCA 009841045 1
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AAI clade 5-21-22
medoid: GCA 002699165 1
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AAI clade 5-21-23
medoid: GCA 002699485 1
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AAI clade 5-21-24
medoid: GCA 002716405 1
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AAI clade 5-21-25
medoid: GCA 002718395 1
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AAI clade 5-21-26
medoid: GCA 009391195 1
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AAI clade 5-21-27
medoid: GCA 016210515 1
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AAI clade 5-21-28
medoid: GCA 008373165 1
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AAI clade 5-21-29
medoid: GCA 003104995 1
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AAI clade 5-21-30
medoid: GCA 903916765 1
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AAI clade 5-21-31
medoid: GCA 016179765 1
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AAI clade 5-21-32
medoid: GCA 003562555 1
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AAI clade 5-21-33
medoid: GCA 004377135 1
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AAI clade 5-21-34
medoid: GCA 009784845 1
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AAI clade 5-21-35
medoid: GCA 016189845 1
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AAI clade 5-21-36
medoid: GCA 011170375 1
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AAI clade 5-21-37
medoid: GCA 018725425 1
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AAI clade 5-21-38
medoid: GCA 014239685 1
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AAI clade 5-21-39
medoid: GCF 001953175 1
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AAI clade 5-21-1
medoid: GCA 005882985 1
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AAI clade 5-22
medoid: GCA 013813355 1
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AAI clade 5-23
medoid: GCA 016706275 1
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AAI clade 5-24
medoid: GCA 003554615 1
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AAI clade 5-25
medoid: GCA 003448875 1
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AAI clade 5-26
medoid: GCA 017622235 1
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AAI clade 5-27
medoid: GCA 001919715 1
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AAI clade 5-28
medoid: GCA 017883385 1
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AAI clade 5-29
medoid: GCA 001805765 1
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AAI clade 5-30
medoid: GCF 002251945 1
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AAI clade 5-31
medoid: GCA 005888435 1
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AAI clade 5-32
medoid: GCA 003222055 1
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AAI clade 5-33
medoid: GCA 005889085 1
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AAI clade 5-34
medoid: GCA 016741895 1
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AAI clade 5-1
medoid: GCA 017449415 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1