AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 16-1
medoid: GCF 002161085 1
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AAI clade 16-2
medoid: GCA 902791215 1
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AAI clade 16-2-1
medoid: GCA 004558025 1
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AAI clade 16-2-2
medoid: GCA 900317855 1
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AAI clade 16-2-3
medoid: GCA 017515345 1
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AAI clade 16-2-4
medoid: GCA 902791215 1
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AAI clade 16-2-5
medoid: GCA 900545405 1
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AAI clade 16-2-5-1
medoid: GCA 004557735 1
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AAI clade 16-2-5-1-1
medoid: GCA 002315975 1
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AAI clade 16-2-5-1-2
medoid: GCA 002404605 1
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AAI clade 16-2-5-1-3
medoid: GCA 017541825 1
4 datasets: GCA 017411265 1 (AAI: 60.95%), GCA 017455685 1 (AAI: 60.55%), GCA 017541825 1 (AAI: 100.0%), and GCA 902768805 1 (AAI: 65.39%)
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AAI clade 16-2-5-1-1
medoid: GCA 002315975 1
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AAI clade 16-2-5-2
medoid: GCA 900545405 1
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AAI clade 16-2-5-3
medoid: GCA 015068035 1
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AAI clade 16-2-5-4
medoid: GCA 012719035 1
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AAI clade 16-2-5-5
medoid: GCA 017477525 1
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AAI clade 16-2-5-6
medoid: GCA 017535635 1
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AAI clade 16-2-5-7
medoid: GCA 900759385 1
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AAI clade 16-2-5-8
medoid: GCA 905234575 1
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AAI clade 16-2-5-1
medoid: GCA 004557735 1
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AAI clade 16-2-1
medoid: GCA 004558025 1
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AAI clade 16-3
medoid: GCA 000432135 1
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AAI clade 16-4
medoid: GCA 018712645 1
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AAI clade 16-5
medoid: GCA 900551355 1
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AAI clade 16-6
medoid: GCA 910587705 1
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AAI clade 16-7
medoid: GCA 902767845 1
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AAI clade 16-8
medoid: GCA 014799505 1
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AAI clade 16-9
medoid: GCA 910588045 1
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AAI clade 16-1
medoid: GCF 002161085 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1