AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 15-1
medoid: GCA 001872265 1
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AAI clade 15-2
medoid: GCA 018896595 1
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AAI clade 15-3
medoid: GCA 001787205 1
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AAI clade 15-4
medoid: GCA 016206085 1
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AAI clade 15-4-1
medoid: GCA 016214105 1
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AAI clade 15-4-2
medoid: GCA 018819405 1
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AAI clade 15-4-3
medoid: GCA 001784435 1
4 datasets: GCA 000992085 1 (AAI: 49.91%), GCA 001784435 1 (AAI: 100.0%), GCA 001784475 1 (AAI: 54.73%), and GCA 018812905 1 (AAI: 48.48%)
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AAI clade 15-4-4
medoid: GCA 016188495 1
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AAI clade 15-4-5
medoid: GCA 000996355 1
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AAI clade 15-4-6
medoid: GCA 018698735 1
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AAI clade 15-4-7
medoid: GCA 001790815 1
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AAI clade 15-4-8
medoid: GCA 001001925 1
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AAI clade 15-4-9
medoid: GCA 001002285 1
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AAI clade 15-4-10
medoid: GCA 016188475 1
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AAI clade 15-4-11
medoid: GCA 001003705 1
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AAI clade 15-4-12
medoid: GCA 001782805 1
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AAI clade 15-4-13
medoid: GCA 001791745 1
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AAI clade 15-4-14
medoid: GCA 001771185 1
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AAI clade 15-4-15
medoid: GCA 001773455 1
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AAI clade 15-4-16
medoid: GCA 001774555 1
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AAI clade 15-4-17
medoid: GCA 001776195 1
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AAI clade 15-4-18
medoid: GCA 001777515 1
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AAI clade 15-4-19
medoid: GCA 001777655 1
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AAI clade 15-4-20
medoid: GCA 001777585 1
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AAI clade 15-4-21
medoid: GCA 001779955 1
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AAI clade 15-4-22
medoid: GCA 001782825 1
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AAI clade 15-4-23
medoid: GCA 001782975 1
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AAI clade 15-4-24
medoid: GCA 016234265 1
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AAI clade 15-4-25
medoid: GCA 003514455 1
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AAI clade 15-4-26
medoid: GCA 016182085 1
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AAI clade 15-4-27
medoid: GCA 002773185 1
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AAI clade 15-4-28
medoid: GCA 018650085 1
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AAI clade 15-4-29
medoid: GCA 018652595 1
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AAI clade 15-4-30
medoid: GCA 002774875 1
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AAI clade 15-4-31
medoid: GCA 001791045 1
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AAI clade 15-4-32
medoid: GCA 001791115 1
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AAI clade 15-4-33
medoid: GCA 003576745 1
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AAI clade 15-4-34
medoid: GCA 001791715 1
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AAI clade 15-4-35
medoid: GCA 001791425 1
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AAI clade 15-4-36
medoid: GCA 001791465 1
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AAI clade 15-4-37
medoid: GCA 016844925 1
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AAI clade 15-4-38
medoid: GCA 001791645 1
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AAI clade 15-4-39
medoid: GCA 001817115 1
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AAI clade 15-4-40
medoid: GCA 016182555 1
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AAI clade 15-4-41
medoid: GCA 001818365 1
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AAI clade 15-4-42
medoid: GCA 001871445 1
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AAI clade 15-4-43
medoid: GCA 001889965 1
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AAI clade 15-4-44
medoid: GCA 018830085 1
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AAI clade 15-4-45
medoid: GCA 002293685 1
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AAI clade 15-4-46
medoid: GCA 018646705 1
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AAI clade 15-4-47
medoid: GCA 002686445 1
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AAI clade 15-4-48
medoid: GCA 002688135 1
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AAI clade 15-4-49
medoid: GCA 002716765 1
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AAI clade 15-4-50
medoid: GCA 903853785 1
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AAI clade 15-4-51
medoid: GCA 003453595 1
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AAI clade 15-4-52
medoid: GCA 016699205 1
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AAI clade 15-4-53
medoid: GCA 004298405 1
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AAI clade 15-4-54
medoid: GCA 903913365 1
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AAI clade 15-4-55
medoid: GCA 016222815 1
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AAI clade 15-4-56
medoid: GCA 003497135 1
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AAI clade 15-4-57
medoid: GCA 003501255 1
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AAI clade 15-4-58
medoid: GCA 003505155 1
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AAI clade 15-4-59
medoid: GCA 016207285 1
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AAI clade 15-4-60
medoid: GCA 903848275 1
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AAI clade 15-4-61
medoid: GCA 003597955 1
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AAI clade 15-4-62
medoid: GCA 004297205 1
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AAI clade 15-4-63
medoid: GCA 016204585 1
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AAI clade 15-4-64
medoid: GCA 007376135 1
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AAI clade 15-4-65
medoid: GCA 016866635 1
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AAI clade 15-4-66
medoid: GCA 012797935 1
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AAI clade 15-4-67
medoid: GCA 018701105 1
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AAI clade 15-4-68
medoid: GCA 015485755 1
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AAI clade 15-4-69
medoid: GCA 015661005 1
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AAI clade 15-4-70
medoid: GCA 016182915 1
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AAI clade 15-4-71
medoid: GCA 016188355 1
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AAI clade 15-4-72
medoid: GCA 016192205 1
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AAI clade 15-4-73
medoid: GCA 016217865 1
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AAI clade 15-4-74
medoid: GCA 016203535 1
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AAI clade 15-4-75
medoid: GCA 016203935 1
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AAI clade 15-4-76
medoid: GCA 016205975 1
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AAI clade 15-4-77
medoid: GCA 016206175 1
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AAI clade 15-4-78
medoid: GCA 016206155 1
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AAI clade 15-4-79
medoid: GCA 016206165 1
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AAI clade 15-4-80
medoid: GCA 016213365 1
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AAI clade 15-4-81
medoid: GCA 016214565 1
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AAI clade 15-4-82
medoid: GCA 016215325 1
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AAI clade 15-4-83
medoid: GCA 016217875 1
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AAI clade 15-4-84
medoid: GCA 018818205 1
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AAI clade 15-4-85
medoid: GCA 018824325 1
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AAI clade 15-4-86
medoid: GCA 903870305 1
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AAI clade 15-4-87
medoid: GCA 903954185 1
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AAI clade 15-4-1
medoid: GCA 016214105 1
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AAI clade 15-5
medoid: GCA 001001115 1
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AAI clade 15-6
medoid: GCA 903837175 1
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AAI clade 15-7
medoid: GCA 016178535 1
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AAI clade 15-8
medoid: GCA 003170325 1
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AAI clade 15-9
medoid: GCA 016217925 1
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AAI clade 15-10
medoid: GCA 018968865 1
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AAI clade 15-1
medoid: GCA 001872265 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1