AAI clade 73-52 | MiGA Online

AAI clade 1 medoid: asm GCA 900155255 1

AAI clade 2 medoid: asm GCA 003225555 1

AAI clade 3 medoid: miga PS19A HMP 2012 SRS017439 bin 51

AAI clade 4 medoid: miga BA16A LX33 339

AAI clade 5 medoid: asm GCA 002344625 1

AAI clade 6 medoid: miga ZQ19A BG 240

AAI clade 7 medoid: asm GCA 003220495 1

AAI clade 8 medoid: asm GCA 001768045 1

AAI clade 9 medoid: miga ZQ19A BG 239

AAI clade 10 medoid: asm GCA 002508675 1

AAI clade 11 medoid: miga PU18A 2609459660

AAI clade 12 medoid: asm GCA 003662385 1

AAI clade 13 medoid: asm GCA 002869845 2

AAI clade 14 medoid: miga ZQ19A BG 334

AAI clade 15 medoid: miga PS19A CM periimplantitis SP 502SPI T016 bin 11

AAI clade 16 medoid: asm GCA 003218215 1

AAI clade 17 medoid: gb PMWP00000000

AAI clade 18 medoid: miga PS19A FerrettiP 2018 CA C10052MS2906SK t0M15 bin 9

AAI clade 19 medoid: miga ZQ19A BG 192

AAI clade 20 medoid: asm GCA 003222055 1

AAI clade 21 medoid: asm GCA 002304435 1

AAI clade 22 medoid: gb PMOA00000000

AAI clade 23 medoid: asm GCA 001180165 1

AAI clade 24 medoid: asm GCA 900155275 1

AAI clade 25 medoid: asm GCA 003562785 1

AAI clade 26 medoid: miga PS19A FengQ 2015 SID531281 bin 23

AAI clade 27 medoid: miga PS19A XieH 2016 YSZC12003 37277 bin 27

AAI clade 28 medoid: miga PS19A CM madagascar A27 02 1FE bin 15

AAI clade 29 medoid: asm GCA 900317055 1

AAI clade 30 medoid: gb MERW00000000

AAI clade 31 medoid: miga PS19A HMP 2012 SRS011126 bin 64

AAI clade 32 medoid: asm GCA 002320005 1

AAI clade 33 medoid: asm GCA 900318825 1

AAI clade 34 medoid: miga BA16A 35 5E

AAI clade 35 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES36 bin 65

AAI clade 36 medoid: asm GCA 001604115 1

AAI clade 37 medoid: miga SW19B 10676 0045 idba bin 101

AAI clade 38 medoid: miga BA16A 35 12A

AAI clade 39 medoid: miga SW19B 10678 0025 idba bin 69

AAI clade 40 medoid: asm GCA 002372655 1

AAI clade 41 medoid: miga ZQ19A BG 670

AAI clade 42 medoid: asm GCA 002732585 1

AAI clade 43 medoid: gb MFTG00000000

AAI clade 44 medoid: asm GCF 000217915 1

AAI clade 45 medoid: miga SW19B 10676 0006 idba bin 64

AAI clade 46 medoid: asm GCA 005503595 1

AAI clade 47 medoid: miga PS19A BritoIL 2016 W1 5 ST bin 1

AAI clade 48 medoid: miga PS19A ZellerG 2014 CCIS38765456ST 20 0 bin 96

AAI clade 49 medoid: asm GCA 002787475 1

AAI clade 50 medoid: asm GCA 002411275 1

AAI clade 51 medoid: asm GCA 001003965 1

AAI clade 52 medoid: asm GCA 900315795 1

AAI clade 53 medoid: asm GCA 002782265 1

AAI clade 54 medoid: asm GCA 002506275 1

AAI clade 55 medoid: asm GCA 002501805 1

AAI clade 56 medoid: miga PS19A HMP 2012 SRS024289 bin 35

AAI clade 57 medoid: asm GCA 002362915 1

AAI clade 58 medoid: miga PS19A FerrettiP 2018 CA C10031IS2534SA t2M15 bin 2

AAI clade 59 medoid: asm GCA 002478295 1

AAI clade 60 medoid: miga PS19A HMP 2012 SRS019127 bin 5

AAI clade 61 medoid: asm GCA 002373045 1

AAI clade 62 medoid: gb PLQF00000000

AAI clade 63 medoid: asm GCA 002352835 1

AAI clade 64 medoid: miga PS19A FengQ 2015 SID31700 bin 66

AAI clade 65 medoid: miga PS19A FerrettiP 2018 CA C10052MS2903SA t0M16 bin 3

AAI clade 66 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES6 bin 23

AAI clade 67 medoid: miga SW19B 10678 0003 idba bin 42

AAI clade 68 medoid: miga PS19A BritoIL 2016 M1 3 ST bin 29

AAI clade 69 medoid: miga PS19A ZeeviD 2015 PNP Main 426 megahit bin 27

AAI clade 70 medoid: asm GCA 002369075 1

AAI clade 71 medoid: miga SW19B 10675 0017 idba bin 79

AAI clade 72 medoid: miga PS19A CM madagascar V53 02 1FE bin 36

AAI clade 73 medoid: miga PS19A RampelliS 2015 H1 bin 24

AAI clade 73-1 medoid: miga SW19B 10674 0021 idba bin 50
AAI clade 73-2 medoid: asm GCA 002329385 1
AAI clade 73-3 medoid: miga PS19A ZeeviD 2015 PNP Main 481 megahit bin 33
AAI clade 73-4 medoid: asm GCA 002339425 1
AAI clade 73-5 medoid: asm GCA 002372215 1
AAI clade 73-6 medoid: miga PS19A LiJ 2017 H3M516804 bin 42
AAI clade 73-7 medoid: asm GCA 002311665 1
AAI clade 73-8 medoid: miga PS19A CM madagascar A28 02 1FE bin 69
AAI clade 73-9 medoid: miga SW19B 10677 min2k bin 2476
AAI clade 73-10 medoid: asm GCA 900314255 1
AAI clade 73-11 medoid: miga PS19A LiJ 2014 MH0303 bin 35
AAI clade 73-12 medoid: miga PS19A RampelliS 2015 H1 bin 24
AAI clade 73-13 medoid: miga SW19B 10677 min2k bin 3140
AAI clade 73-14 medoid: miga PS19A BackhedF 2015 SID42 4M bin 11
AAI clade 73-15 medoid: miga SW19B 10677 0027 idba bin 96
AAI clade 73-16 medoid: miga SW19B 10676 0037 idba bin 67
AAI clade 73-17 medoid: asm GCA 002414075 1
AAI clade 73-18 medoid: miga PS19A BritoIL 2016 M1 65 ST bin 2
AAI clade 73-19 medoid: asm GCA 900317555 1
AAI clade 73-20 medoid: miga PS19A XieH 2016 YSZC12003 35712 bin 43
AAI clade 73-21 medoid: miga SW19B 10676 0017 idba bin 142
AAI clade 73-22 medoid: asm GCA 002361735 1
AAI clade 73-23 medoid: miga SW19B 10678 0047 idba bin 72
AAI clade 73-24 medoid: miga PS19A VogtmannE 2016 MMRS40913371ST 27 0 0 bin 18
AAI clade 73-25 medoid: miga SW19B 10676 0042 idba bin 130
AAI clade 73-26 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES30 bin 101
AAI clade 73-27 medoid: asm GCA 900320345 1
AAI clade 73-28 medoid: asm GCA 002448395 1
AAI clade 73-29 medoid: miga SW19B 10674 0003 idba bin 9
AAI clade 73-30 medoid: miga SW19B 10674 0022 idba bin 38
AAI clade 73-31 medoid: miga SW19B 10677 0006 idba bin 55
AAI clade 73-32 medoid: asm GCA 002494135 1
AAI clade 73-33 medoid: miga SW19B 10677 min2k bin 2145
AAI clade 73-34 medoid: miga SW19B 10676 0036 idba bin 65
AAI clade 73-35 medoid: miga SW19B 10677 min2k bin 1732
AAI clade 73-36 medoid: miga SW19B 10677 0029 idba bin 176
AAI clade 73-37 medoid: miga SW19B 10677 0027 idba bin 33
AAI clade 73-38 medoid: asm GCA 002394165 1
AAI clade 73-39 medoid: miga PS19A CM madagascar A94 02 1FE bin 73
AAI clade 73-40 medoid: miga SW19B 10674 min2k bin 226
AAI clade 73-41 medoid: miga PS19A VatanenT 2016 G80284 bin 14
AAI clade 73-42 medoid: asm GCA 002449995 1
AAI clade 73-43 medoid: asm GCA 002490775 1
AAI clade 73-44 medoid: miga PS19A LeChatelierE 2013 MH0419 bin 21
AAI clade 73-45 medoid: asm GCA 002481215 1
AAI clade 73-46 medoid: miga PS19A SchirmerM 2016 G89027 bin 28
AAI clade 73-47 medoid: miga SW19B 10678 min2k bin 1803
AAI clade 73-48 medoid: asm GCA 002293475 1
AAI clade 73-49 medoid: miga PS19A RampelliS 2015 H17 bin 87
AAI clade 73-50 medoid: miga SW19B 10676 0013 idba bin 40
AAI clade 73-51 medoid: asm GCA 900321855 1
AAI clade 73-52 medoid: miga SW19B 10677 0023 idba bin 237

2 datasets: asm GCA 900321215 1 (AAI: 64.07%) and miga SW19B 10677 0023 idba bin 237 (AAI: 100.0%)
AAI clade 73-53 medoid: miga SW19B 10675 min2k bin 1145
AAI clade 73-54 medoid: miga SW19B 10676 0048 idba bin 15
AAI clade 73-55 medoid: asm GCA 900317585 1
AAI clade 73-56 medoid: miga SW19B 10677 0051 idba bin 67
AAI clade 73-57 medoid: miga SW19B 10677 min2k bin 4689
AAI clade 73-58 medoid: miga PS19A WenC 2017 N036 bin 27
AAI clade 73-59 medoid: miga SW19B 10677 min2k bin 2462
AAI clade 73-60 medoid: miga SW19B 10572 0012 idba bin 65
AAI clade 73-61 medoid: miga SW19B 10674 min2k bin 2744
AAI clade 73-62 medoid: miga SW19B 10675 min2k bin 3785
AAI clade 73-63 medoid: miga SW19B 10677 min2k bin 4359
AAI clade 73-64 medoid: miga PS19A CosteaPI 2017 SID713A051 11 0 0 bin 58
AAI clade 73-65 medoid: miga SW19B 10674 min2k bin 3329
AAI clade 73-66 medoid: miga PS19A KarlssonFH 2013 S144 bin 49
AAI clade 73-67 medoid: miga SW19B 10676 min2k bin 887
AAI clade 73-68 medoid: miga SW19B 10677 0009 idba bin 200
AAI clade 73-69 medoid: miga PS19A BritoIL 2016 W2 11 ST bin 30
AAI clade 73-70 medoid: miga PS19A BackhedF 2015 SID566 M bin 14
AAI clade 73-71 medoid: miga PS19A BackhedF 2015 SID87 12M bin 15
AAI clade 73-72 medoid: miga PS19A HMP 2012 SRS019389 bin 3
AAI clade 73-73 medoid: miga PS19A ChengpingW 2017 AS19raw bin 38
AAI clade 73-74 medoid: miga PS19A FengQ 2015 SID531775 bin 38
AAI clade 73-75 medoid: miga PS19A HeQ 2017 SZAXPI029598 166 bin 26
AAI clade 73-76 medoid: miga PS19A FengQ 2015 SID531775 bin 60
AAI clade 73-77 medoid: miga PS19A HMP 2012 SRS063932 bin 82
AAI clade 73-78 medoid: miga PS19A LoombaR 2017 SID1050 bax bin 31
AAI clade 73-79 medoid: miga PS19A XieH 2016 YSZC12003 36058 bin 33
AAI clade 73-80 medoid: miga PS19A VincentC 2016 MM049 1 megahit bin 17

AAI clade 74 medoid: miga PS19A HMP 2012 SRS024138 bin 26

AAI clade 75 medoid: asm GCA 002294525 1

AAI clade 76 medoid: miga PS19A BritoIL 2016 WL 32 ST bin 18

AAI clade 77 medoid: miga PS19A LeChatelierE 2013 MH0333 bin 59

AAI clade 78 medoid: miga SW19B 10677 0035 idba bin 49

AAI clade 79 medoid: miga PS19A XieH 2016 YSZC12003 37293 bin 71

AAI clade 80 medoid: miga PS19A ZeeviD 2015 PNP Main 401 megahit bin 4

AAI clade 81 medoid: miga PS19A OhJ 2014 MET0095 bin 1

AAI clade 82 medoid: miga PS19A BritoIL 2016 M1 59 ST bin 42

AAI clade 83 medoid: miga PS19A VincentC 2016 MM027 2 megahit bin 14

AAI clade 84 medoid: asm GCA 003020965 1

AAI clade 85 medoid: miga PS19A CosteaPI 2017 daisy 11 386 0 bin 19

AAI clade 86 medoid: miga PS19A HMP 2012 SRS023595 bin 63

AAI clade 87 medoid: asm GCA 001701225 1

AAI clade 88 medoid: miga SW19B 10676 0021 idba bin 107

AAI clade 89 medoid: miga SW19B 10678 0026 idba bin 16

AAI clade 90 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES2 bin 43

AAI clade 91 medoid: miga PS19A VogtmannE 2016 MMRS43563715ST 27 0 0 bin 27

AAI clade 92 medoid: miga SW19B 10674 0007 idba bin 173

AAI clade 93 medoid: miga PS19A VatanenT 2016 G80490 bin 1

AAI-based medoid clustering

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