AAI clade 2-39 | MiGA Online

AAI clade 1 medoid: asm GCA 900155255 1

AAI clade 2 medoid: asm GCA 003225555 1

AAI clade 2-1 medoid: asm GCA 003820265 1
AAI clade 2-2 medoid: gb PMTR00000000
AAI clade 2-3 medoid: gb PLBY00000000
AAI clade 2-4 medoid: asm GCA 003224955 1
AAI clade 2-5 medoid: gb PLWX00000000
AAI clade 2-6 medoid: asm GCA 002347025 1
AAI clade 2-7 medoid: asm GCA 003225355 1
AAI clade 2-8 medoid: gb PLSX00000000
AAI clade 2-9 medoid: asm GCA 002478115 1
AAI clade 2-10 medoid: asm GCA 002433055 1
AAI clade 2-11 medoid: asm GCA 002298225 1
AAI clade 2-12 medoid: asm GCA 002333435 1
AAI clade 2-13 medoid: asm GCA 003222975 1
AAI clade 2-14 medoid: asm GCA 002483445 1
AAI clade 2-15 medoid: asm GCA 003223575 1
AAI clade 2-16 medoid: asm GCA 001767445 1
AAI clade 2-17 medoid: asm GCA 001767075 1
AAI clade 2-18 medoid: asm GCA 003175835 1
AAI clade 2-19 medoid: asm GCA 001768615 1
AAI clade 2-20 medoid: asm GCA 001773825 1
AAI clade 2-21 medoid: gb PKUZ00000000
AAI clade 2-22 medoid: gb PLGA00000000
AAI clade 2-23 medoid: asm GCA 900069905 1
AAI clade 2-24 medoid: asm GCA 900069915 1
AAI clade 2-25 medoid: asm GCA 003223615 1
AAI clade 2-26 medoid: asm GCA 003223835 1
AAI clade 2-27 medoid: asm GCA 003222765 1
AAI clade 2-28 medoid: asm GCA 003222845 1
AAI clade 2-29 medoid: asm GCA 003175865 1
AAI clade 2-30 medoid: miga SS18B METABAT VerySpecific 187
AAI clade 2-31 medoid: asm GCA 003223115 1
AAI clade 2-32 medoid: asm GCA 001918335 1
AAI clade 2-33 medoid: asm GCA 003223295 1
AAI clade 2-34 medoid: asm GCA 003223315 1
AAI clade 2-35 medoid: gb PLJN00000000
AAI clade 2-36 medoid: asm GCA 003223995 1
AAI clade 2-37 medoid: asm GCA 003225315 1
AAI clade 2-38 medoid: asm GCA 003224585 1
AAI clade 2-39 medoid: asm GCA 003225365 1

2 datasets: asm GCA 003224695 1 (AAI: 63.79%) and asm GCA 003225365 1 (AAI: 100.0%)
AAI clade 2-40 medoid: asm GCA 003224725 1
AAI clade 2-41 medoid: asm GCA 003224755 1
AAI clade 2-42 medoid: asm GCA 003225455 1
AAI clade 2-43 medoid: asm GCA 003224975 1
AAI clade 2-44 medoid: asm GCA 003225595 1
AAI clade 2-45 medoid: asm GCA 003225655 1
AAI clade 2-46 medoid: asm GCA 003225175 1
AAI clade 2-47 medoid: asm GCA 004377405 1
AAI clade 2-48 medoid: asm GCA 001464575 1
AAI clade 2-49 medoid: gb PMUN00000000
AAI clade 2-50 medoid: gb PMOP00000000
AAI clade 2-51 medoid: gb PMYB00000000
AAI clade 2-52 medoid: gb PMQX00000000
AAI clade 2-53 medoid: gb PMRN00000000
AAI clade 2-54 medoid: miga SS18B METABAT VerySpecific 174
AAI clade 2-55 medoid: gb PMLZ00000000
AAI clade 2-56 medoid: gb PKZC00000000
AAI clade 2-57 medoid: gb PLDH00000000
AAI clade 2-58 medoid: gb PMYH00000000
AAI clade 2-59 medoid: gb PMEV00000000
AAI clade 2-60 medoid: gb PKXT00000000
AAI clade 2-61 medoid: gb PLPJ00000000
AAI clade 2-62 medoid: gb PMKG00000000
AAI clade 2-63 medoid: gb MEKM00000000
AAI clade 2-64 medoid: miga SS18B METABAT VerySpecific 96
AAI clade 2-65 medoid: miga SS18B METABAT VerySpecific 166
AAI clade 2-66 medoid: miga DE18A TARA PON MAG 00066
AAI clade 2-67 medoid: miga DE18A TARA PON MAG 00072
AAI clade 2-68 medoid: miga ZQ19A BG 232
AAI clade 2-69 medoid: miga ZQ19A BG 283
AAI clade 2-70 medoid: miga CB19A Bin 100

AAI clade 3 medoid: miga PS19A HMP 2012 SRS017439 bin 51

AAI clade 4 medoid: miga BA16A LX33 339

AAI clade 5 medoid: asm GCA 002344625 1

AAI clade 6 medoid: miga ZQ19A BG 240

AAI clade 7 medoid: asm GCA 003220495 1

AAI clade 8 medoid: asm GCA 001768045 1

AAI clade 9 medoid: miga ZQ19A BG 239

AAI clade 10 medoid: asm GCA 002508675 1

AAI clade 11 medoid: miga PU18A 2609459660

AAI clade 12 medoid: asm GCA 003662385 1

AAI clade 13 medoid: asm GCA 002869845 2

AAI clade 14 medoid: miga ZQ19A BG 334

AAI clade 15 medoid: miga PS19A CM periimplantitis SP 502SPI T016 bin 11

AAI clade 16 medoid: asm GCA 003218215 1

AAI clade 17 medoid: gb PMWP00000000

AAI clade 18 medoid: miga PS19A FerrettiP 2018 CA C10052MS2906SK t0M15 bin 9

AAI clade 19 medoid: miga ZQ19A BG 192

AAI clade 20 medoid: asm GCA 003222055 1

AAI clade 21 medoid: asm GCA 002304435 1

AAI clade 22 medoid: gb PMOA00000000

AAI clade 23 medoid: asm GCA 001180165 1

AAI clade 24 medoid: asm GCA 900155275 1

AAI clade 25 medoid: asm GCA 003562785 1

AAI clade 26 medoid: miga PS19A FengQ 2015 SID531281 bin 23

AAI clade 27 medoid: miga PS19A XieH 2016 YSZC12003 37277 bin 27

AAI clade 28 medoid: miga PS19A CM madagascar A27 02 1FE bin 15

AAI clade 29 medoid: asm GCA 900317055 1

AAI clade 30 medoid: gb MERW00000000

AAI clade 31 medoid: miga PS19A HMP 2012 SRS011126 bin 64

AAI clade 32 medoid: asm GCA 002320005 1

AAI clade 33 medoid: asm GCA 900318825 1

AAI clade 34 medoid: miga BA16A 35 5E

AAI clade 35 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES36 bin 65

AAI clade 36 medoid: asm GCA 001604115 1

AAI clade 37 medoid: miga SW19B 10676 0045 idba bin 101

AAI clade 38 medoid: miga BA16A 35 12A

AAI clade 39 medoid: miga SW19B 10678 0025 idba bin 69

AAI clade 40 medoid: asm GCA 002372655 1

AAI clade 41 medoid: miga ZQ19A BG 670

AAI clade 42 medoid: asm GCA 002732585 1

AAI clade 43 medoid: gb MFTG00000000

AAI clade 44 medoid: asm GCF 000217915 1

AAI clade 45 medoid: miga SW19B 10676 0006 idba bin 64

AAI clade 46 medoid: asm GCA 005503595 1

AAI clade 47 medoid: miga PS19A BritoIL 2016 W1 5 ST bin 1

AAI clade 48 medoid: miga PS19A ZellerG 2014 CCIS38765456ST 20 0 bin 96

AAI clade 49 medoid: asm GCA 002787475 1

AAI clade 50 medoid: asm GCA 002411275 1

AAI clade 51 medoid: asm GCA 001003965 1

AAI clade 52 medoid: asm GCA 900315795 1

AAI clade 53 medoid: asm GCA 002782265 1

AAI clade 54 medoid: asm GCA 002506275 1

AAI clade 55 medoid: asm GCA 002501805 1

AAI clade 56 medoid: miga PS19A HMP 2012 SRS024289 bin 35

AAI clade 57 medoid: asm GCA 002362915 1

AAI clade 58 medoid: miga PS19A FerrettiP 2018 CA C10031IS2534SA t2M15 bin 2

AAI clade 59 medoid: asm GCA 002478295 1

AAI clade 60 medoid: miga PS19A HMP 2012 SRS019127 bin 5

AAI clade 61 medoid: asm GCA 002373045 1

AAI clade 62 medoid: gb PLQF00000000

AAI clade 63 medoid: asm GCA 002352835 1

AAI clade 64 medoid: miga PS19A FengQ 2015 SID31700 bin 66

AAI clade 65 medoid: miga PS19A FerrettiP 2018 CA C10052MS2903SA t0M16 bin 3

AAI clade 66 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES6 bin 23

AAI clade 67 medoid: miga SW19B 10678 0003 idba bin 42

AAI clade 68 medoid: miga PS19A BritoIL 2016 M1 3 ST bin 29

AAI clade 69 medoid: miga PS19A ZeeviD 2015 PNP Main 426 megahit bin 27

AAI clade 70 medoid: asm GCA 002369075 1

AAI clade 71 medoid: miga SW19B 10675 0017 idba bin 79

AAI clade 72 medoid: miga PS19A CM madagascar V53 02 1FE bin 36

AAI clade 73 medoid: miga PS19A RampelliS 2015 H1 bin 24

AAI clade 74 medoid: miga PS19A HMP 2012 SRS024138 bin 26

AAI clade 75 medoid: asm GCA 002294525 1

AAI clade 76 medoid: miga PS19A BritoIL 2016 WL 32 ST bin 18

AAI clade 77 medoid: miga PS19A LeChatelierE 2013 MH0333 bin 59

AAI clade 78 medoid: miga SW19B 10677 0035 idba bin 49

AAI clade 79 medoid: miga PS19A XieH 2016 YSZC12003 37293 bin 71

AAI clade 80 medoid: miga PS19A ZeeviD 2015 PNP Main 401 megahit bin 4

AAI clade 81 medoid: miga PS19A OhJ 2014 MET0095 bin 1

AAI clade 82 medoid: miga PS19A BritoIL 2016 M1 59 ST bin 42

AAI clade 83 medoid: miga PS19A VincentC 2016 MM027 2 megahit bin 14

AAI clade 84 medoid: asm GCA 003020965 1

AAI clade 85 medoid: miga PS19A CosteaPI 2017 daisy 11 386 0 bin 19

AAI clade 86 medoid: miga PS19A HMP 2012 SRS023595 bin 63

AAI clade 87 medoid: asm GCA 001701225 1

AAI clade 88 medoid: miga SW19B 10676 0021 idba bin 107

AAI clade 89 medoid: miga SW19B 10678 0026 idba bin 16

AAI clade 90 medoid: miga PS19A Bengtsson PalmeJ 2015 TRAVELRES2 bin 43

AAI clade 91 medoid: miga PS19A VogtmannE 2016 MMRS43563715ST 27 0 0 bin 27

AAI clade 92 medoid: miga SW19B 10674 0007 idba bin 173

AAI clade 93 medoid: miga PS19A VatanenT 2016 G80490 bin 1

AAI-based medoid clustering

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