ANI clade 2-1-70 | MiGA Online

ANI-based medoid clustering

The ANI clusters provide a high resolution view of the below-species structure of the datasets and facilitate genome-based typing.

ANI clade 1 medoid: uncultured Rothia sp. GCA 946222235 1
ANI clade 2 medoid: Rothia mucilaginosa GCA 004799365 1
- ANI clade 2-1 medoid: Rothia mucilaginosa GCA 004799365 1
  - ANI clade 2-1-1 medoid: Rothia sp. HMSC061D12 GCA 001836735 1
  - ANI clade 2-1-2 medoid: Rothia sp. HMSC071C12 GCA 001813895 1
  - ANI clade 2-1-3 medoid: Rothia sp. HMSC071B01 GCA 001808945 1
  - ANI clade 2-1-4 medoid: Rothia sp. HMSC073B08 GCA 001812975 1
  - ANI clade 2-1-5 medoid: Rothia sp. HMSC065B04 GCA 001812285 1
  - ANI clade 2-1-6 medoid: Rothia sp. HMSC065C03 GCA 001837295 1
  - ANI clade 2-1-7 medoid: Rothia sp. HMSC065D09 GCA 001815155 1
  - ANI clade 2-1-8 medoid: Rothia mucilaginosa GCA 004799365 1
  - ANI clade 2-1-9 medoid: uncultured Rothia sp. GCA 937900265 1
  - ANI clade 2-1-10 medoid: Rothia sp. HMSC072B04 GCA 001813725 1
  - ANI clade 2-1-11 medoid: Rothia sp. HMSC078H08 GCA 001808955 1
  - ANI clade 2-1-12 medoid: Rothia sp. HMSC066G07 GCA 001814485 1
  - ANI clade 2-1-13 medoid: Rothia sp. HMSC069C04 GCA 001812895 1
  - ANI clade 2-1-14 medoid: Rothia sp. HMSC076D04 GCA 001814645 1
  - ANI clade 2-1-15 medoid: Rothia mucilaginosa GCA 002386365 1
  - ANI clade 2-1-16 medoid: Rothia sp. HMSC064F07 GCA 001837265 1
  - ANI clade 2-1-17 medoid: Rothia sp. HMSC065C12 GCA 001812085 1
  - ANI clade 2-1-18 medoid: uncultured Rothia sp. GCA 916438355 1
  - ANI clade 2-1-19 medoid: uncultured Rothia sp. GCA 916715725 1
  - ANI clade 2-1-20 medoid: uncultured Rothia sp. GCA 916715745 1
  - ANI clade 2-1-21 medoid: uncultured Rothia sp. GCA 916049685 1
  - ANI clade 2-1-22 medoid: Rothia sp. in high G C Gram positive bacteria GCA 019423945 1
  - ANI clade 2-1-23 medoid: uncultured Rothia sp. GCA 937925535 1
  - ANI clade 2-1-24 medoid: uncultured Rothia sp. GCA 937984615 1
  - ANI clade 2-1-25 medoid: uncultured Rothia sp. GCA 937890405 1
  - ANI clade 2-1-26 medoid: uncultured Rothia sp. GCA 916050395 1
  - ANI clade 2-1-27 medoid: uncultured Rothia sp. GCA 916709935 1
  - ANI clade 2-1-28 medoid: Rothia sp. in high G C Gram positive bacteria GCA 015259765 1
  - ANI clade 2-1-29 medoid: Rothia sp. in high G C Gram positive bacteria GCA 015259885 1
  - ANI clade 2-1-30 medoid: Rothia sp. in high G C Gram positive bacteria GCA 015265395 1
  - ANI clade 2-1-31 medoid: Rothia sp. in high G C Gram positive bacteria GCA 015265375 1
  - ANI clade 2-1-32 medoid: Rothia sp. in high G C Gram positive bacteria GCA 019423905 1
  - ANI clade 2-1-33 medoid: uncultured Rothia sp. GCA 916049665 1
  - ANI clade 2-1-34 medoid: uncultured Rothia sp. GCA 902373445 1
  - ANI clade 2-1-35 medoid: uncultured Rothia sp. GCA 902461255 1
  - ANI clade 2-1-36 medoid: Rothia sp. HMSC078H08 GCA 905372185 1
  - ANI clade 2-1-37 medoid: Rothia sp. in high G C Gram positive bacteria GCA 019411125 1
  - ANI clade 2-1-38 medoid: Rothia sp. HMSC062H08 GCA 001810775 1
  - ANI clade 2-1-39 medoid: Rothia sp. HMSC069C10 GCA 001812205 1
  - ANI clade 2-1-40 medoid: Rothia sp. HMSC061C12 GCA 001815755 1
  - ANI clade 2-1-41 medoid: Rothia mucilaginosa GCA 001060545 1
  - ANI clade 2-1-42 medoid: Rothia mucilaginosa GCA 001061655 1
  - ANI clade 2-1-43 medoid: Rothia mucilaginosa GCA 001063545 1
  - ANI clade 2-1-44 medoid: Rothia mucilaginosa GCA 001067855 1
  - ANI clade 2-1-45 medoid: Rothia mucilaginosa GCA 001064585 1
  - ANI clade 2-1-46 medoid: Rothia mucilaginosa GCA 001067345 1
  - ANI clade 2-1-47 medoid: Rothia mucilaginosa M508 GCA 000231235 1
  - ANI clade 2-1-48 medoid: Rothia mucilaginosa GCA 001064265 1
  - ANI clade 2-1-49 medoid: Rothia mucilaginosa GCA 018364315 1
  - ANI clade 2-1-50 medoid: Rothia mucilaginosa GCA 937936065 1
  - ANI clade 2-1-51 medoid: Rothia mucilaginosa GCA 916049745 1
  - ANI clade 2-1-52 medoid: Rothia mucilaginosa GCA 001914075 1
  - ANI clade 2-1-53 medoid: Rothia mucilaginosa GCA 916720575 1
  - ANI clade 2-1-54 medoid: Rothia mucilaginosa GCA 018381075 1
  - ANI clade 2-1-55 medoid: Rothia mucilaginosa GCA 905369905 1
  - ANI clade 2-1-56 medoid: Rothia mucilaginosa GCA 015259935 1
  - ANI clade 2-1-57 medoid: Rothia mucilaginosa GCA 015260035 1
  - ANI clade 2-1-58 medoid: Rothia mucilaginosa GCA 937936265 1
  - ANI clade 2-1-59 medoid: Rothia mucilaginosa GCA 015259965 1
  - ANI clade 2-1-60 medoid: Rothia mucilaginosa GCA 001063995 1
  - ANI clade 2-1-61 medoid: Rothia mucilaginosa GCA 001062855 1
  - ANI clade 2-1-62 medoid: Rothia mucilaginosa GCA 927912645 1
  - ANI clade 2-1-63 medoid: Rothia mucilaginosa GCA 927911755 1
  - ANI clade 2-1-64 medoid: Rothia mucilaginosa GCA 943914625 1
  - ANI clade 2-1-65 medoid: Rothia mucilaginosa GCA 905372905 1
  - ANI clade 2-1-66 medoid: Rothia mucilaginosa GCA 018365715 1
  - ANI clade 2-1-67 medoid: Rothia mucilaginosa GCA 905369935 1
  - ANI clade 2-1-68 medoid: Rothia mucilaginosa GCA 019423915 1
  - ANI clade 2-1-69 medoid: Rothia mucilaginosa GCA 946221295 1
  - ANI clade 2-1-70 medoid: Rothia mucilaginosa GCA 019418805 1
    
    1 dataset: Rothia mucilaginosa GCA 019418805 1 (ANI: 100.0%)
  - ANI clade 2-1-71 medoid: Rothia mucilaginosa ATCC 25296 GCA 000175615 1
  - ANI clade 2-1-72 medoid: Rothia mucilaginosa GCA 001065115 1
  - ANI clade 2-1-73 medoid: Rothia mucilaginosa GCA 015259955 1
  - ANI clade 2-1-74 medoid: Rothia mucilaginosa GCA 015259835 1
  - ANI clade 2-1-75 medoid: Rothia mucilaginosa GCA 916048175 1
  - ANI clade 2-1-76 medoid: Rothia mucilaginosa GCA 943912535 1
  - ANI clade 2-1-77 medoid: Rothia mucilaginosa GCA 905370325 1
  - ANI clade 2-1-78 medoid: Rothia mucilaginosa GCA 927911585 1
  - ANI clade 2-1-79 medoid: Rothia mucilaginosa GCA 916050265 1
  - ANI clade 2-1-80 medoid: Rothia mucilaginosa GCA 019334805 1
  - ANI clade 2-1-81 medoid: Rothia mucilaginosa DY 18 GCA 000011025 1
  - ANI clade 2-1-82 medoid: Rothia mucilaginosa GCA 015240415 1
  - ANI clade 2-1-83 medoid: Rothia mucilaginosa GCA 001548235 1
- ANI clade 2-2 medoid: Rothia mucilaginosa GCA 014894835 1
- ANI clade 2-3 medoid: Rothia mucilaginosa GCA 029850835 1
- ANI clade 2-4 medoid: Rothia mucilaginosa GCA 905206135 1
- ANI clade 2-5 medoid: Rothia mucilaginosa GCA 023303065 1
ANI clade 3 medoid: Rothia aeria GCA 905370405 1
ANI clade 4 medoid: Rothia sp. ND6WE1A GCA 001683935 1
ANI clade 5 medoid: Rothia mucilaginosa GCA 001065135 1
ANI clade 6 medoid: Rothia sp. P100 GCA 023712425 1
ANI clade 7 medoid: Rothia sp. ZJ932 GCA 016924835 1
ANI clade 8 medoid: uncultured Rothia sp. GCA 902373285 1
ANI clade 9 medoid: uncultured Rothia sp. GCA 902461355 1
ANI clade 10 medoid: Rothia nasimurium GCA 928382285 1
ANI clade 11 medoid: Rothia nasisuis GCA 928392685 1
ANI clade 12 medoid: Rothia nasimurium GCA 928391935 1
ANI clade 13 medoid: Rothia koreensis GCA 004136575 1
ANI clade 14 medoid: Rothia kristinae GCA 025150355 1

ANI-based medoid clustering

A collaboration between