ANI-based medoid clustering
The ANI clusters provide a high resolution view of the below-species structure of the datasets and facilitate genome-based typing.
-
ANI clade 1
medoid: uncultured Rothia sp. GCA 946222235 1
-
ANI clade 2
medoid: Rothia mucilaginosa GCA 004799365 1
-
ANI clade 2-1
medoid: Rothia mucilaginosa GCA 004799365 1
-
ANI clade 2-1-1
medoid: Rothia sp. HMSC061D12 GCA 001836735 1
-
ANI clade 2-1-2
medoid: Rothia sp. HMSC071C12 GCA 001813895 1
-
ANI clade 2-1-3
medoid: Rothia sp. HMSC071B01 GCA 001808945 1
-
ANI clade 2-1-4
medoid: Rothia sp. HMSC073B08 GCA 001812975 1
-
ANI clade 2-1-5
medoid: Rothia sp. HMSC065B04 GCA 001812285 1
-
ANI clade 2-1-6
medoid: Rothia sp. HMSC065C03 GCA 001837295 1
-
ANI clade 2-1-7
medoid: Rothia sp. HMSC065D09 GCA 001815155 1
-
ANI clade 2-1-8
medoid: Rothia mucilaginosa GCA 004799365 1
-
ANI clade 2-1-9
medoid: uncultured Rothia sp. GCA 937900265 1
-
ANI clade 2-1-10
medoid: Rothia sp. HMSC072B04 GCA 001813725 1
-
ANI clade 2-1-11
medoid: Rothia sp. HMSC078H08 GCA 001808955 1
-
ANI clade 2-1-12
medoid: Rothia sp. HMSC066G07 GCA 001814485 1
-
ANI clade 2-1-13
medoid: Rothia sp. HMSC069C04 GCA 001812895 1
-
ANI clade 2-1-14
medoid: Rothia sp. HMSC076D04 GCA 001814645 1
-
ANI clade 2-1-15
medoid: Rothia mucilaginosa GCA 002386365 1
-
ANI clade 2-1-16
medoid: Rothia sp. HMSC064F07 GCA 001837265 1
-
ANI clade 2-1-17
medoid: Rothia sp. HMSC065C12 GCA 001812085 1
1 dataset: Rothia sp. HMSC065C12 GCA 001812085 1 (ANI: 100.0%)
-
ANI clade 2-1-18
medoid: uncultured Rothia sp. GCA 916438355 1
-
ANI clade 2-1-19
medoid: uncultured Rothia sp. GCA 916715725 1
-
ANI clade 2-1-20
medoid: uncultured Rothia sp. GCA 916715745 1
-
ANI clade 2-1-21
medoid: uncultured Rothia sp. GCA 916049685 1
-
ANI clade 2-1-22
medoid: Rothia sp. in high G C Gram positive bacteria GCA 019423945 1
-
ANI clade 2-1-23
medoid: uncultured Rothia sp. GCA 937925535 1
-
ANI clade 2-1-24
medoid: uncultured Rothia sp. GCA 937984615 1
-
ANI clade 2-1-25
medoid: uncultured Rothia sp. GCA 937890405 1
-
ANI clade 2-1-26
medoid: uncultured Rothia sp. GCA 916050395 1
-
ANI clade 2-1-27
medoid: uncultured Rothia sp. GCA 916709935 1
-
ANI clade 2-1-28
medoid: Rothia sp. in high G C Gram positive bacteria GCA 015259765 1
-
ANI clade 2-1-29
medoid: Rothia sp. in high G C Gram positive bacteria GCA 015259885 1
-
ANI clade 2-1-30
medoid: Rothia sp. in high G C Gram positive bacteria GCA 015265395 1
-
ANI clade 2-1-31
medoid: Rothia sp. in high G C Gram positive bacteria GCA 015265375 1
-
ANI clade 2-1-32
medoid: Rothia sp. in high G C Gram positive bacteria GCA 019423905 1
-
ANI clade 2-1-33
medoid: uncultured Rothia sp. GCA 916049665 1
-
ANI clade 2-1-34
medoid: uncultured Rothia sp. GCA 902373445 1
-
ANI clade 2-1-35
medoid: uncultured Rothia sp. GCA 902461255 1
-
ANI clade 2-1-36
medoid: Rothia sp. HMSC078H08 GCA 905372185 1
-
ANI clade 2-1-37
medoid: Rothia sp. in high G C Gram positive bacteria GCA 019411125 1
-
ANI clade 2-1-38
medoid: Rothia sp. HMSC062H08 GCA 001810775 1
-
ANI clade 2-1-39
medoid: Rothia sp. HMSC069C10 GCA 001812205 1
-
ANI clade 2-1-40
medoid: Rothia sp. HMSC061C12 GCA 001815755 1
-
ANI clade 2-1-41
medoid: Rothia mucilaginosa GCA 001060545 1
-
ANI clade 2-1-42
medoid: Rothia mucilaginosa GCA 001061655 1
-
ANI clade 2-1-43
medoid: Rothia mucilaginosa GCA 001063545 1
-
ANI clade 2-1-44
medoid: Rothia mucilaginosa GCA 001067855 1
-
ANI clade 2-1-45
medoid: Rothia mucilaginosa GCA 001064585 1
-
ANI clade 2-1-46
medoid: Rothia mucilaginosa GCA 001067345 1
-
ANI clade 2-1-47
medoid: Rothia mucilaginosa M508 GCA 000231235 1
-
ANI clade 2-1-48
medoid: Rothia mucilaginosa GCA 001064265 1
-
ANI clade 2-1-49
medoid: Rothia mucilaginosa GCA 018364315 1
-
ANI clade 2-1-50
medoid: Rothia mucilaginosa GCA 937936065 1
-
ANI clade 2-1-51
medoid: Rothia mucilaginosa GCA 916049745 1
-
ANI clade 2-1-52
medoid: Rothia mucilaginosa GCA 001914075 1
-
ANI clade 2-1-53
medoid: Rothia mucilaginosa GCA 916720575 1
-
ANI clade 2-1-54
medoid: Rothia mucilaginosa GCA 018381075 1
-
ANI clade 2-1-55
medoid: Rothia mucilaginosa GCA 905369905 1
-
ANI clade 2-1-56
medoid: Rothia mucilaginosa GCA 015259935 1
-
ANI clade 2-1-57
medoid: Rothia mucilaginosa GCA 015260035 1
-
ANI clade 2-1-58
medoid: Rothia mucilaginosa GCA 937936265 1
-
ANI clade 2-1-59
medoid: Rothia mucilaginosa GCA 015259965 1
-
ANI clade 2-1-60
medoid: Rothia mucilaginosa GCA 001063995 1
-
ANI clade 2-1-61
medoid: Rothia mucilaginosa GCA 001062855 1
-
ANI clade 2-1-62
medoid: Rothia mucilaginosa GCA 927912645 1
-
ANI clade 2-1-63
medoid: Rothia mucilaginosa GCA 927911755 1
-
ANI clade 2-1-64
medoid: Rothia mucilaginosa GCA 943914625 1
-
ANI clade 2-1-65
medoid: Rothia mucilaginosa GCA 905372905 1
-
ANI clade 2-1-66
medoid: Rothia mucilaginosa GCA 018365715 1
-
ANI clade 2-1-67
medoid: Rothia mucilaginosa GCA 905369935 1
-
ANI clade 2-1-68
medoid: Rothia mucilaginosa GCA 019423915 1
-
ANI clade 2-1-69
medoid: Rothia mucilaginosa GCA 946221295 1
-
ANI clade 2-1-70
medoid: Rothia mucilaginosa GCA 019418805 1
-
ANI clade 2-1-71
medoid: Rothia mucilaginosa ATCC 25296 GCA 000175615 1
-
ANI clade 2-1-72
medoid: Rothia mucilaginosa GCA 001065115 1
-
ANI clade 2-1-73
medoid: Rothia mucilaginosa GCA 015259955 1
-
ANI clade 2-1-74
medoid: Rothia mucilaginosa GCA 015259835 1
-
ANI clade 2-1-75
medoid: Rothia mucilaginosa GCA 916048175 1
-
ANI clade 2-1-76
medoid: Rothia mucilaginosa GCA 943912535 1
-
ANI clade 2-1-77
medoid: Rothia mucilaginosa GCA 905370325 1
-
ANI clade 2-1-78
medoid: Rothia mucilaginosa GCA 927911585 1
-
ANI clade 2-1-79
medoid: Rothia mucilaginosa GCA 916050265 1
-
ANI clade 2-1-80
medoid: Rothia mucilaginosa GCA 019334805 1
-
ANI clade 2-1-81
medoid: Rothia mucilaginosa DY 18 GCA 000011025 1
-
ANI clade 2-1-82
medoid: Rothia mucilaginosa GCA 015240415 1
-
ANI clade 2-1-83
medoid: Rothia mucilaginosa GCA 001548235 1
-
ANI clade 2-1-1
medoid: Rothia sp. HMSC061D12 GCA 001836735 1
-
ANI clade 2-2
medoid: Rothia mucilaginosa GCA 014894835 1
-
ANI clade 2-3
medoid: Rothia mucilaginosa GCA 029850835 1
-
ANI clade 2-4
medoid: Rothia mucilaginosa GCA 905206135 1
-
ANI clade 2-5
medoid: Rothia mucilaginosa GCA 023303065 1
-
ANI clade 2-1
medoid: Rothia mucilaginosa GCA 004799365 1
-
ANI clade 3
medoid: Rothia aeria GCA 905370405 1
-
ANI clade 4
medoid: Rothia sp. ND6WE1A GCA 001683935 1
-
ANI clade 5
medoid: Rothia mucilaginosa GCA 001065135 1
-
ANI clade 6
medoid: Rothia sp. P100 GCA 023712425 1
-
ANI clade 7
medoid: Rothia sp. ZJ932 GCA 016924835 1
-
ANI clade 8
medoid: uncultured Rothia sp. GCA 902373285 1
-
ANI clade 9
medoid: uncultured Rothia sp. GCA 902461355 1
-
ANI clade 10
medoid: Rothia nasimurium GCA 928382285 1
-
ANI clade 11
medoid: Rothia nasisuis GCA 928392685 1
-
ANI clade 12
medoid: Rothia nasimurium GCA 928391935 1
-
ANI clade 13
medoid: Rothia koreensis GCA 004136575 1
-
ANI clade 14
medoid: Rothia kristinae GCA 025150355 1