ANI-based medoid clustering

The ANI clusters provide a high resolution view of the below-species structure of the datasets and facilitate genome-based typing.

• ANI clade 1 medoid: uncultured Rothia sp. GCA 946222235 1
• ANI clade 2 medoid: Rothia mucilaginosa GCA 004799365 1
• ANI clade 3 medoid: Rothia aeria GCA 905370405 1
• ANI clade 4 medoid: Rothia sp. ND6WE1A GCA 001683935 1
• ANI clade 5 medoid: Rothia mucilaginosa GCA 001065135 1
• ANI clade 6 medoid: Rothia sp. P100 GCA 023712425 1
• ANI clade 7 medoid: Rothia sp. ZJ932 GCA 016924835 1
• ANI clade 8 medoid: uncultured Rothia sp. GCA 902373285 1
• ANI clade 9 medoid: uncultured Rothia sp. GCA 902461355 1
• ANI clade 10 medoid: Rothia nasimurium GCA 928382285 1
  • ANI clade 10-1 medoid: Candidatus Rothia avicola GCA 019115985 1
  • ANI clade 10-2 medoid: Candidatus Rothia avistercoris GCA 019120655 1
  • ANI clade 10-3 medoid: Rothia nasimurium GCA 928392785 1
  • ANI clade 10-4 medoid: Rothia nasimurium GCA 928381905 1
    1 dataset: Rothia nasimurium GCA 928381905 1 (ANI: 100.0%)
  • ANI clade 10-5 medoid: Rothia nasimurium GCA 928381705 1
  • ANI clade 10-6 medoid: Rothia nasimurium GCA 928381435 1
  • ANI clade 10-7 medoid: Rothia nasimurium GCA 928392795 1
  • ANI clade 10-8 medoid: Rothia nasimurium GCA 928381465 1
  • ANI clade 10-9 medoid: Rothia nasimurium GCA 928381455 1
  • ANI clade 10-10 medoid: Rothia nasimurium GCA 015235405 1
  • ANI clade 10-11 medoid: Rothia nasimurium GCA 928392065 1
  • ANI clade 10-12 medoid: Rothia nasimurium GCA 928381425 1
  • ANI clade 10-13 medoid: Rothia nasimurium GCA 928381415 1
  • ANI clade 10-14 medoid: Rothia sp. SD9660Na GCA 030064065 1
• ANI clade 11 medoid: Rothia nasisuis GCA 928392685 1
• ANI clade 12 medoid: Rothia nasimurium GCA 928391935 1
• ANI clade 13 medoid: Rothia koreensis GCA 004136575 1
• ANI clade 14 medoid: Rothia kristinae GCA 025150355 1