ANI-based medoid clustering
The ANI clusters provide a high resolution view of the below-species structure of the datasets and facilitate genome-based typing.
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ANI clade 1
medoid: uncultured Rothia sp. GCA 946222235 1
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ANI clade 1-1
medoid: Rothia sp. HMSC067H10 GCA 001810635 1
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ANI clade 1-2
medoid: Rothia sp. HMSC069C01 GCA 001814655 1
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ANI clade 1-3
medoid: Rothia sp. HMSC065G12 GCA 001811455 1
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ANI clade 1-4
medoid: Rothia sp. HMSC08A08 GCA 001808385 1
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ANI clade 1-5
medoid: Rothia sp. HMSC065D02 GCA 001815285 1
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ANI clade 1-6
medoid: Rothia sp. HMSC071F11 GCA 001809115 1
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ANI clade 1-7
medoid: Rothia sp. HMSC036D11 GCA 001814205 1
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ANI clade 1-8
medoid: Rothia sp. HMSC058E10 GCA 001809415 1
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ANI clade 1-9
medoid: uncultured Rothia sp. GCA 946222235 1
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ANI clade 1-10
medoid: Rothia sp. HMSC064D08 GCA 001809525 1
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ANI clade 1-11
medoid: Rothia dentocariosa GCA 001062425 1
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ANI clade 1-12
medoid: Rothia dentocariosa GCA 004563855 1
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ANI clade 1-13
medoid: Rothia dentocariosa GCA 916438935 1
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ANI clade 1-14
medoid: Rothia dentocariosa GCA 002276695 1
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ANI clade 1-15
medoid: Rothia dentocariosa GCA 938018175 1
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ANI clade 1-16
medoid: Rothia dentocariosa GCA 905372075 1
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ANI clade 1-17
medoid: Rothia dentocariosa GCA 015260065 1
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ANI clade 1-18
medoid: Rothia dentocariosa GCA 915066855 1
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ANI clade 1-19
medoid: Rothia dentocariosa GCA 916720605 1
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ANI clade 1-20
medoid: Rothia dentocariosa GCA 927911365 1
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ANI clade 1-21
medoid: Rothia dentocariosa GCA 927911075 1
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ANI clade 1-22
medoid: Rothia dentocariosa GCA 905373875 1
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ANI clade 1-23
medoid: Rothia dentocariosa GCA 927912675 1
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ANI clade 1-24
medoid: Rothia dentocariosa ATCC 17931 GCA 000164695 2
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ANI clade 1-25
medoid: Rothia dentocariosa GCA 002554715 1
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ANI clade 1-26
medoid: Rothia dentocariosa GCA 002861025 1
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ANI clade 1-27
medoid: Rothia dentocariosa GCA 023713025 1
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ANI clade 1-28
medoid: Rothia dentocariosa GCA 901875315 1
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ANI clade 1-29
medoid: Rothia dentocariosa GCA 029850855 1
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ANI clade 1-30
medoid: Rothia dentocariosa GCA 001064485 1
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ANI clade 1-31
medoid: Rothia dentocariosa GCA 029851045 1
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ANI clade 1-32
medoid: Rothia dentocariosa GCA 012641675 1
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ANI clade 1-33
medoid: Rothia dentocariosa GCA 001066935 1
1 dataset: Rothia dentocariosa GCA 001066935 1 (ANI: 100.0%)
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ANI clade 1-34
medoid: Rothia dentocariosa GCA 029850905 1
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ANI clade 1-35
medoid: Rothia dentocariosa GCA 900638535 1
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ANI clade 1-36
medoid: Rothia dentocariosa GCA 013267735 1
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ANI clade 1-37
medoid: Rothia dentocariosa GCA 019297775 1
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ANI clade 1-1
medoid: Rothia sp. HMSC067H10 GCA 001810635 1
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ANI clade 2
medoid: Rothia mucilaginosa GCA 004799365 1
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ANI clade 3
medoid: Rothia aeria GCA 905370405 1
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ANI clade 4
medoid: Rothia sp. ND6WE1A GCA 001683935 1
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ANI clade 5
medoid: Rothia mucilaginosa GCA 001065135 1
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ANI clade 6
medoid: Rothia sp. P100 GCA 023712425 1
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ANI clade 7
medoid: Rothia sp. ZJ932 GCA 016924835 1
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ANI clade 8
medoid: uncultured Rothia sp. GCA 902373285 1
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ANI clade 9
medoid: uncultured Rothia sp. GCA 902461355 1
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ANI clade 10
medoid: Rothia nasimurium GCA 928382285 1
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ANI clade 11
medoid: Rothia nasisuis GCA 928392685 1
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ANI clade 12
medoid: Rothia nasimurium GCA 928391935 1
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ANI clade 13
medoid: Rothia koreensis GCA 004136575 1
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ANI clade 14
medoid: Rothia kristinae GCA 025150355 1