ANI-based medoid clustering

The ANI clusters provide a high resolution view of the below-species structure of the datasets and facilitate genome-based typing.

  • ANI clade 1 medoid: uncultured Rothia sp. GCA 946222235 1
    • ANI clade 1-1 medoid: Rothia sp. HMSC067H10 GCA 001810635 1
    • ANI clade 1-2 medoid: Rothia sp. HMSC069C01 GCA 001814655 1
    • ANI clade 1-3 medoid: Rothia sp. HMSC065G12 GCA 001811455 1
    • ANI clade 1-4 medoid: Rothia sp. HMSC08A08 GCA 001808385 1
    • ANI clade 1-5 medoid: Rothia sp. HMSC065D02 GCA 001815285 1
    • ANI clade 1-6 medoid: Rothia sp. HMSC071F11 GCA 001809115 1
    • ANI clade 1-7 medoid: Rothia sp. HMSC036D11 GCA 001814205 1
    • ANI clade 1-8 medoid: Rothia sp. HMSC058E10 GCA 001809415 1
    • ANI clade 1-9 medoid: uncultured Rothia sp. GCA 946222235 1
    • ANI clade 1-10 medoid: Rothia sp. HMSC064D08 GCA 001809525 1
    • ANI clade 1-11 medoid: Rothia dentocariosa GCA 001062425 1
    • ANI clade 1-12 medoid: Rothia dentocariosa GCA 004563855 1
    • ANI clade 1-13 medoid: Rothia dentocariosa GCA 916438935 1
    • ANI clade 1-14 medoid: Rothia dentocariosa GCA 002276695 1
    • ANI clade 1-15 medoid: Rothia dentocariosa GCA 938018175 1
    • ANI clade 1-16 medoid: Rothia dentocariosa GCA 905372075 1
    • ANI clade 1-17 medoid: Rothia dentocariosa GCA 015260065 1
    • ANI clade 1-18 medoid: Rothia dentocariosa GCA 915066855 1
    • ANI clade 1-19 medoid: Rothia dentocariosa GCA 916720605 1
    • ANI clade 1-20 medoid: Rothia dentocariosa GCA 927911365 1
      1 dataset: Rothia dentocariosa GCA 927911365 1 (ANI: 100.0%)
    • ANI clade 1-21 medoid: Rothia dentocariosa GCA 927911075 1
    • ANI clade 1-22 medoid: Rothia dentocariosa GCA 905373875 1
    • ANI clade 1-23 medoid: Rothia dentocariosa GCA 927912675 1
    • ANI clade 1-24 medoid: Rothia dentocariosa ATCC 17931 GCA 000164695 2
    • ANI clade 1-25 medoid: Rothia dentocariosa GCA 002554715 1
    • ANI clade 1-26 medoid: Rothia dentocariosa GCA 002861025 1
    • ANI clade 1-27 medoid: Rothia dentocariosa GCA 023713025 1
    • ANI clade 1-28 medoid: Rothia dentocariosa GCA 901875315 1
    • ANI clade 1-29 medoid: Rothia dentocariosa GCA 029850855 1
    • ANI clade 1-30 medoid: Rothia dentocariosa GCA 001064485 1
    • ANI clade 1-31 medoid: Rothia dentocariosa GCA 029851045 1
    • ANI clade 1-32 medoid: Rothia dentocariosa GCA 012641675 1
    • ANI clade 1-33 medoid: Rothia dentocariosa GCA 001066935 1
    • ANI clade 1-34 medoid: Rothia dentocariosa GCA 029850905 1
    • ANI clade 1-35 medoid: Rothia dentocariosa GCA 900638535 1
    • ANI clade 1-36 medoid: Rothia dentocariosa GCA 013267735 1
    • ANI clade 1-37 medoid: Rothia dentocariosa GCA 019297775 1
  • ANI clade 2 medoid: Rothia mucilaginosa GCA 004799365 1
  • ANI clade 3 medoid: Rothia aeria GCA 905370405 1
  • ANI clade 4 medoid: Rothia sp. ND6WE1A GCA 001683935 1
  • ANI clade 5 medoid: Rothia mucilaginosa GCA 001065135 1
  • ANI clade 6 medoid: Rothia sp. P100 GCA 023712425 1
  • ANI clade 7 medoid: Rothia sp. ZJ932 GCA 016924835 1
  • ANI clade 8 medoid: uncultured Rothia sp. GCA 902373285 1
  • ANI clade 9 medoid: uncultured Rothia sp. GCA 902461355 1
  • ANI clade 10 medoid: Rothia nasimurium GCA 928382285 1
  • ANI clade 11 medoid: Rothia nasisuis GCA 928392685 1
  • ANI clade 12 medoid: Rothia nasimurium GCA 928391935 1
  • ANI clade 13 medoid: Rothia koreensis GCA 004136575 1
  • ANI clade 14 medoid: Rothia kristinae GCA 025150355 1