AAI clade 73-8-52 | MiGA Online

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AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

AAI clade 1 medoid: Brucella daejeonensis GCA 014199265 1
AAI clade 2 medoid: GCA 017448355 1
AAI clade 3 medoid: GCA 017467885 1
AAI clade 4 medoid: Pedobacter duraquae GCA 004362245 1
AAI clade 5 medoid: Streptomyces angustmyceticus GCA 002154415 1
AAI clade 6 medoid: Pseudomonas migulae GCA 024169545 1
AAI clade 7 medoid: miga SS18A Bin 41 contigs
AAI clade 8 medoid: Mucilaginibacter ginkgonis GCA 009754905 2
AAI clade 9 medoid: GCA 900755995 1
AAI clade 10 medoid: GCF 013113835 1
AAI clade 11 medoid: Secundilactobacillus odoratitofui DSM 19909 JCM 15043 GCA 001434895 1
AAI clade 12 medoid: GCA 016840965 1
AAI clade 13 medoid: GCA 017622235 1
AAI clade 14 medoid: GCA 904390925 1
AAI clade 15 medoid: GCA 002375985 1
AAI clade 16 medoid: GCA 003963015 1
AAI clade 17 medoid: GCA 001771585 1
AAI clade 18 medoid: GCF 018398895 1
AAI clade 19 medoid: GCA 001295775 1
AAI clade 20 medoid: Qipengyuania aquimaris GCA 009827445 1
AAI clade 21 medoid: GCF 009363535 1
AAI clade 22 medoid: GCA 904374795 1
AAI clade 23 medoid: GCA 903955385 1
AAI clade 24 medoid: GCA 903887975 1
AAI clade 25 medoid: GCA 902602655 1
AAI clade 26 medoid: GCA 905235755 1
AAI clade 27 medoid: Anaerovorax odorimutans DSM 5092 GCA 000426305 1
AAI clade 28 medoid: GCA 903909555 1
AAI clade 29 medoid: Marinomonas aquimarina GCA 900089755 1
AAI clade 30 medoid: GCA 015061955 1
AAI clade 31 medoid: GCA 000421065 1
AAI clade 32 medoid: GCA 002438845 1
AAI clade 33 medoid: GCA 003602665 1
AAI clade 34 medoid: GCA 910585295 1
AAI clade 35 medoid: Nocardioides iriomotensis GCA 004168035 1
AAI clade 36 medoid: GCA 017608235 1
AAI clade 37 medoid: GCF 004332155 1
AAI clade 38 medoid: GCA 009712635 1
AAI clade 39 medoid: GCA 903926605 1
AAI clade 40 medoid: GCA 017645955 1
AAI clade 41 medoid: GCA 016793015 1
AAI clade 42 medoid: GCA 900538305 1
AAI clade 43 medoid: GCA 001002765 1
AAI clade 44 medoid: GCA 902559935 1
AAI clade 45 medoid: GCA 011371455 1
AAI clade 46 medoid: GCA 000435515 1
AAI clade 47 medoid: Anaerostipes butyraticus GCA 016586355 1
AAI clade 48 medoid: GCF 002835935 1
AAI clade 49 medoid: miga PS19A RaymondF 2016 P20E90 bin 24
AAI clade 50 medoid: GCA 002338255 1
AAI clade 51 medoid: Haloprofundus salinisoli GCA 020097815 1
AAI clade 52 medoid: GCA 900167925 1
AAI clade 53 medoid: GCA 900550065 1
AAI clade 54 medoid: GCA 002314915 1
AAI clade 55 medoid: Rhizorhabdus dicambivorans GCA 002355275 1
AAI clade 56 medoid: GCA 005882335 1
AAI clade 57 medoid: GCA 011065225 1
AAI clade 58 medoid: GCA 016781775 1
AAI clade 59 medoid: GCA 002362595 1
AAI clade 60 medoid: GCA 016214555 1
AAI clade 61 medoid: GCF 014764505 1
AAI clade 62 medoid: GCA 902623215 1
AAI clade 63 medoid: GCA 003514205 1
AAI clade 64 medoid: GCF 009707955 1
AAI clade 65 medoid: GCF 000348745 1
AAI clade 66 medoid: GCA 900772425 1
AAI clade 67 medoid: GCF 003590645 1
AAI clade 68 medoid: GCF 902506105 1
AAI clade 69 medoid: GCF 013407275 1
AAI clade 70 medoid: GCA 015494795 1
AAI clade 71 medoid: GCA 016709995 1
AAI clade 72 medoid: GCA 002493965 1
AAI clade 73 medoid: GCA 009469665 1
- AAI clade 73-1 medoid: GCF 002217795 2
- AAI clade 73-2 medoid: Morococcus cerebrosus GCA 000813705 1
- AAI clade 73-3 medoid: GCF 900103165 1
- AAI clade 73-4 medoid: GCA 016709335 1
- AAI clade 73-5 medoid: Nitrosomonas communis GCA 001007935 1
- AAI clade 73-6 medoid: Sulfuricella denitrificans skB26 GCA 000297055 2
- AAI clade 73-7 medoid: Deefgea piscis GCA 013284055 1
- AAI clade 73-8 medoid: GCA 017983615 1
  - AAI clade 73-8-1 medoid: Azonexus hydrophilus DSM 23864 GCA 000429605 1
  - AAI clade 73-8-2 medoid: Azospira restricta GCA 016858125 1
  - AAI clade 73-8-3 medoid: Azovibrio restrictus DSM 23866 GCA 000429665 1
  - AAI clade 73-8-4 medoid: Fluviibacter phosphoraccumulans GCA 016110345 1
  - AAI clade 73-8-5 medoid: Azospira inquinata GCA 018905915 1
  - AAI clade 73-8-6 medoid: Acidithiobacillus sulfuriphilus GCA 003721225 1
  - AAI clade 73-8-7 medoid: GCF 003112695 1
  - AAI clade 73-8-8 medoid: Dechloromonas agitata GCA 028864255 1
  - AAI clade 73-8-9 medoid: Dechloromonas hortensis GCA 009469765 1
  - AAI clade 73-8-10 medoid: Oryzomicrobium terrae GCA 008274805 1
  - AAI clade 73-8-11 medoid: Oxalobacter formigenes GCA 027158485 1
  - AAI clade 73-8-12 medoid: GCA 002170285 1
  - AAI clade 73-8-13 medoid: GCA 002337055 1
  - AAI clade 73-8-14 medoid: GCA 002840765 1
  - AAI clade 73-8-15 medoid: GCA 017302355 1
  - AAI clade 73-8-16 medoid: GCA 002440665 1
  - AAI clade 73-8-17 medoid: GCA 002747975 1
  - AAI clade 73-8-18 medoid: GCA 018828385 1
  - AAI clade 73-8-19 medoid: GCA 003158255 1
  - AAI clade 73-8-20 medoid: GCA 003488465 1
  - AAI clade 73-8-21 medoid: GCA 004555545 1
  - AAI clade 73-8-22 medoid: GCA 016720065 1
  - AAI clade 73-8-23 medoid: GCA 009777245 1
  - AAI clade 73-8-24 medoid: GCA 009777925 1
  - AAI clade 73-8-25 medoid: GCA 009779265 1
  - AAI clade 73-8-26 medoid: GCA 009780885 1
  - AAI clade 73-8-27 medoid: GCA 009923755 1
  - AAI clade 73-8-28 medoid: GCA 016709495 1
  - AAI clade 73-8-29 medoid: GCA 011525985 1
  - AAI clade 73-8-30 medoid: GCA 017983615 1
  - AAI clade 73-8-31 medoid: GCA 013139875 1
  - AAI clade 73-8-32 medoid: GCA 016790845 1
  - AAI clade 73-8-33 medoid: GCA 014377305 1
  - AAI clade 73-8-34 medoid: GCA 016710885 1
  - AAI clade 73-8-35 medoid: GCA 016721185 1
  - AAI clade 73-8-36 medoid: GCA 016793525 1
  - AAI clade 73-8-37 medoid: GCA 016861105 1
  - AAI clade 73-8-38 medoid: GCA 018261935 1
  - AAI clade 73-8-39 medoid: GCA 018262285 1
  - AAI clade 73-8-40 medoid: GCA 018262875 1
  - AAI clade 73-8-41 medoid: GCA 018608565 1
  - AAI clade 73-8-42 medoid: GCA 018883385 1
  - AAI clade 73-8-43 medoid: GCF 905120355 1
  - AAI clade 73-8-44 medoid: GCA 900552915 1
  - AAI clade 73-8-45 medoid: GCA 905215795 1
  - AAI clade 73-8-46 medoid: GCA 905339345 1
  - AAI clade 73-8-47 medoid: asm GCA 001828925 1
  - AAI clade 73-8-48 medoid: asm GCA 003647135 1
  - AAI clade 73-8-49 medoid: asm GCA 003820055 1
  - AAI clade 73-8-50 medoid: gb PMDV00000000
  - AAI clade 73-8-51 medoid: miga PS19A DavidLA 2015 LD Run2 08 bin 6
  - AAI clade 73-8-52 medoid: miga PS19A LiJ 2014 DLM006 IE bin 17
    
    1 dataset: miga PS19A LiJ 2014 DLM006 IE bin 17 (AAI: 100.0%)
  - AAI clade 73-8-53 medoid: miga PS19A OhJ 2014 MET0207 megahit bin 12
- AAI clade 73-9 medoid: GCA 016183575 1
- AAI clade 73-10 medoid: GCA 016709665 1
- AAI clade 73-11 medoid: GCA 017592775 1
- AAI clade 73-12 medoid: GCA 007280315 1
AAI clade 74 medoid: GCA 001799635 1
AAI clade 75 medoid: GCA 016650235 1
AAI clade 76 medoid: Ochrovirga pacifica GCA 000220525 2
AAI clade 77 medoid: GCA 009903855 1
AAI clade 78 medoid: GCA 019204045 1
AAI clade 79 medoid: GCA 902783375 1
AAI clade 80 medoid: GCF 000350105 1
AAI clade 81 medoid: GCA 903901345 1
AAI clade 82 medoid: GCA 015075425 1
AAI clade 83 medoid: GCA 001508835 1
AAI clade 84 medoid: GCA 017746715 1
AAI clade 85 medoid: Nocardioides plantarum GCA 006346395 1
AAI clade 86 medoid: GCA 017438285 1
AAI clade 87 medoid: GCA 002712945 1
AAI clade 88 medoid: GCF 002214625 1
AAI clade 89 medoid: GCA 902773215 1
AAI clade 90 medoid: GCA 002723385 1
AAI clade 91 medoid: GCA 019113455 1
AAI clade 92 medoid: GCA 016286935 1
AAI clade 93 medoid: GCA 003566775 1

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