AAI clade 10-6-3-1-13 | MiGA Online

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AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

AAI clade 1 medoid: Rahnella aceris GCF 011684115 1
AAI clade 2 medoid: Sinorhizobium saheli GCF 001651875 1
AAI clade 3 medoid: Oceanobacillus limi GCF 900111445 1
AAI clade 4 medoid: Pseudomonas alcaligenes GCF 900455475 1
AAI clade 5 medoid: Alkalibacterium pelagium GCF 007991315 1
AAI clade 6 medoid: Stenotrophomonas nematodicola GCF 009467805 1
AAI clade 7 medoid: Thermaerobacter marianensis DSM 12885 GCF 000184705 1
AAI clade 8 medoid: Megamonas hypermegale DSM 1672 GCF 000423385 1
AAI clade 9 medoid: Actinomyces gaoshouyii GCF 002072175 1
AAI clade 10 medoid: Micromonospora sagamiensis GCF 014680085 1
- AAI clade 10-1 medoid: Mycolicibacterium senegalense GCF 031458155 1
- AAI clade 10-2 medoid: Mycobacterium parascrofulaceum ATCC BAA 614 GCF 000164135 1
- AAI clade 10-3 medoid: Rhodococcus wratislaviensis GCF 900455735 1
- AAI clade 10-4 medoid: Actinoplanes pyxinae GCF 026626335 1
- AAI clade 10-5 medoid: Corynebacterium tuberculostearicum GCF 013408445 1
- AAI clade 10-6 medoid: Micromonospora solifontis GCF 003725545 1
  - AAI clade 10-6-1 medoid: Micromonospora vinacea GCF 015751785 1
  - AAI clade 10-6-2 medoid: Catellatospora paridis GCF 009720365 1
  - AAI clade 10-6-3 medoid: Micromonospora solifontis GCF 003725545 1
    
    AAI clade 10-6-3-1 medoid: Micromonospora solifontis GCF 003725545 1
    
    AAI clade 10-6-3-1-1 medoid: Micromonospora coxensis GCF 900090295 1
    
    AAI clade 10-6-3-1-2 medoid: Micromonospora zingiberis GCF 004331455 1
    
    AAI clade 10-6-3-1-3 medoid: Dactylosporangium siamense GCF 016862795 1
    
    AAI clade 10-6-3-1-4 medoid: Dactylosporangium fulvum GCF 025137375 1
    
    AAI clade 10-6-3-1-5 medoid: Micromonospora aurantiaca ATCC 27029 GCF 000145235 1
    
    AAI clade 10-6-3-1-6 medoid: Micromonospora fulviviridis GCF 014648395 1
    
    AAI clade 10-6-3-1-7 medoid: Micromonospora antibiotica GCF 017599305 1
    
    AAI clade 10-6-3-1-8 medoid: Micromonospora echinospora GCF 002266845 1
    
    AAI clade 10-6-3-1-9 medoid: Micromonospora andamanensis GCF 016863495 1
    
    AAI clade 10-6-3-1-10 medoid: Actinocatenispora sera GCF 000720965 1
    
    AAI clade 10-6-3-1-11 medoid: Asanoa hainanensis GCF 900188485 1
    
    AAI clade 10-6-3-1-12 medoid: Ferrimicrobium acidiphilum DSM 19497 GCF 000745905 1
    
    AAI clade 10-6-3-1-13 medoid: Longispora fulva GCF 015751905 1
    
    1 dataset: Longispora fulva GCF 015751905 1 (AAI: 100.0%)
    
    AAI clade 10-6-3-1-14 medoid: Micromonospora citrea GCF 900090315 1
    
    AAI clade 10-6-3-1-15 medoid: Phytomonospora endophytica GCF 014202425 1
    
    AAI clade 10-6-3-1-16 medoid: Planosporangium mesophilum GCF 011947235 1
    
    AAI clade 10-6-3-1-17 medoid: Acidimicrobium ferrooxidans DSM 10331 GCF 000023265 1
    
    AAI clade 10-6-3-1-18 medoid: Actinocatenispora rupis GCF 016861975 1
    
    AAI clade 10-6-3-1-19 medoid: Fodinicola acaciae GCF 010993745 1
    
    AAI clade 10-6-3-1-20 medoid: Longispora albida DSM 44784 GCF 000379825 1
    
    AAI clade 10-6-3-1-21 medoid: Micromonospora avicenniae GCF 900156065 1
    
    AAI clade 10-6-3-1-22 medoid: Micromonospora eburnea GCF 900090225 1
    
    AAI clade 10-6-3-1-23 medoid: Micromonospora kangleipakensis GCF 004217615 1
    
    AAI clade 10-6-3-1-24 medoid: Micromonospora mirobrigensis GCF 900091555 1
    
    AAI clade 10-6-3-1-25 medoid: Polymorphospora rubra GCF 018324255 1
    
    AAI clade 10-6-3-1-26 medoid: Miltoncostaea oceani GCF 018141545 1
    
    AAI clade 10-6-3-1-27 medoid: Natronosporangium hydrolyticum GCF 016925615 1
    
    AAI clade 10-6-3-1-28 medoid: Phytohabitans suffuscus GCF 011764565 1
    
    AAI clade 10-6-3-1-29 medoid: Pilimelia terevasa GCF 014647915 1
    
    AAI clade 10-6-3-1-30 medoid: Plantactinospora alkalitolerans GCF 015690345 1
    
    AAI clade 10-6-3-1-31 medoid: Plantactinospora mayteni GCF 016862935 1
    
    AAI clade 10-6-3-1-32 medoid: Rhabdothermincola sediminis GCF 014805525 1
    
    AAI clade 10-6-3-1-33 medoid: Rugosimonospora africana GCF 016862975 1
    
    AAI clade 10-6-3-1-34 medoid: Stackebrandtia endophytica GCF 006716355 1
    
    AAI clade 10-6-3-1-35 medoid: Stackebrandtia nassauensis DSM 44728 GCF 000024545 1
    
    AAI clade 10-6-3-1-36 medoid: Virgisporangium aliadipatigenens GCF 016863615 1
    
    AAI clade 10-6-3-1-37 medoid: Virgisporangium ochraceum GCF 016863655 1
    
    AAI clade 10-6-3-2 medoid: Salinispora fenicalii GCF 000514815 1
    
    AAI clade 10-6-3-3 medoid: Catenuloplanes niger GCF 031458255 1
- AAI clade 10-7 medoid: Amycolatopsis decaplanina DSM 44594 GCF 000342005 1
- AAI clade 10-8 medoid: Gordonia alkanivorans NBRC 16433 GCF 000225505 1
- AAI clade 10-9 medoid: Nocardia araoensis NBRC 100135 GCF 000308435 1
- AAI clade 10-10 medoid: Pseudonocardia halophobica GCF 027922425 1
- AAI clade 10-11 medoid: Lentzea atacamensis GCF 003148865 1
- AAI clade 10-12 medoid: Saccharopolyspora hirsuta GCF 008630535 1
- AAI clade 10-13 medoid: Geodermatophilus siccatus GCF 900103785 1
AAI clade 11 medoid: Nonomuraea indica GCF 002850745 1
AAI clade 12 medoid: Jiella avicenniae GCF 021390325 1
AAI clade 13 medoid: Chitinophaga terrae ex Kim and Jung 2007 GCF 900107795 1
AAI clade 14 medoid: Zeimonas arvi GCF 008039575 1
AAI clade 15 medoid: Cognatiyoonia koreensis GCF 900109295 1
AAI clade 16 medoid: Legionella beliardensis GCF 900452395 1
AAI clade 17 medoid: Dorea hominis GCF 014287705 1
AAI clade 18 medoid: Massilia putida GCF 001941825 1
AAI clade 19 medoid: Phycicoccus avicenniae GCF 018139485 1
AAI clade 20 medoid: Lelliottia steviae GCF 015209785 1
AAI clade 21 medoid: Natrarchaeobaculum aegyptiacum GCF 002156705 1
AAI clade 22 medoid: Aquifex aeolicus VF5 GCF 000008625 1
AAI clade 23 medoid: Campylobacter showae GCF 004803815 1
AAI clade 24 medoid: Mannheimia bovis GCF 014541205 1
AAI clade 25 medoid: Solobacterium moorei DSM 22971 GCF 000425005 1
AAI clade 26 medoid: Neptunicella marina GCF 014270035 1
AAI clade 27 medoid: Sphingomonas sabuli GCF 014352855 1
AAI clade 28 medoid: Luteolibacter marinus GCF 014904755 1
AAI clade 29 medoid: Mycoplasmoides genitalium GCF 036689675 1
AAI clade 30 medoid: Brevundimonas huaxiensis GCF 014218725 1
AAI clade 31 medoid: Lysobacter spongiicola DSM 21749 GCF 900167055 1
AAI clade 32 medoid: Glycomyces dulcitolivorans GCF 003265355 1
AAI clade 33 medoid: Methylovulum miyakonense HT12 GCF 000384075 1
AAI clade 34 medoid: Candidatus Fiminaster equi GCA 018064745 1

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