Tethybacter castelliTs


Citation

Formal styling
Tethybacter castelliTs corrig. Taylor et al., 2021 (valid 2024)
Effective publication
Taylor et al., 2021
Corrigendum
In SeqCode Registry from “Tethybacter castellensis” (sic)
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:hcdu3qk3 (validated)
Cannonical URL
https://seqco.de/i:43924

Nomenclature

Rank
Species
Syllabication
cas'tel.li
Etymology
L. gen. n. castelli, originating from a fort, referring to Bare Island at Botany Bay, NSW, Australia.
Nomenclatural type
NCBI Assembly: GCA_036679665.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Heterotrophic, symbiotic bacteria of the marine sponge Cymbastela concentrica.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Tethybacterales » Tethybacteraceae » Tethybacter » Tethybacter castelliTs
Parent
Tethybacter assigned in Taylor et al., 2021

Genomics

Accession
NCBI Assembly:GCA_036679665.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.69%
  • Contamination: 0.0%
  • Quality: 95.69
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
5.5 ×
Source
Other features
  • G+C Content: 50.32%
  • Coding Density: 92.69%
  • Codon Table: 11
  • N50: 44,178 bp
  • Contigs: 71
  • Largest Contig: 160,261 bp
  • Assembly Length: 1,689,527 bp
  • Ambiguous Assembly Fraction: 0.054%
Submitter comments
CheckM was employed to estimate metagenome-assembled-genome completeness and contamination using the taxon-specific workflow. IMG statistics report the number of rRNA and tRNA genes present in the assembly.
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Taylor, Jessica A. 2 months ago
Submitted by
Taylor, Jessica A. about 2 months ago
Curators
Validated by
Palmer, Marike 3 days ago

Publications
1

Citation Title
Taylor et al., 2021, The ISME Journal Phylogeny resolved, metabolism revealed: functional radiation within a widespread and divergent clade of sponge symbionts
Effective publication
Assigned this taxon



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