Hepatoplasma scabrum


Citation

Formal styling
Hepatoplasma scabrum Kawato et al., 2024
Effective publication
Kawato et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:zkcp7nm0 (validated)
Cannonical URL
https://seqco.de/i:23842

Nomenclature

Rank
Species
Syllabication
sca'brum
Etymology
L. neut. adj. scabrum, rough, scabrous
Nomenclatural type
INSDC Nucleotide: AP027133.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Symbiont of terrestrial isopod Porcellio scaber
Classification
Bacteria » Mycoplasmatota » Mollicutes » Mycoplasmatales » “Hepatoplasmataceae” » Hepatoplasma » Hepatoplasma scabrum
Parent
Hepatoplasma

Genomics

Accession
INSDC Nucleotide:AP027133.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
25.0 ×
Source
Other features
  • G+C Content: 24.7%
  • Coding Density: 93.37%
  • Codon Table: 4
  • N50: 606,194 bp
  • Contigs: 1
  • Largest Contig: 606,194 bp
  • Assembly Length: 606,194 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Search sequences
Local history
Registered by
Kawato, Satoshi over 1 year ago
Submitted by
Kawato, Satoshi about 2 months ago
Curators
Endorsed by
Palmer, Marike about 1 month ago
Validated by
Palmer, Marike about 1 month ago

Publications
2

Citation Title
Kawato et al., 2024, Access Microbiology Metagenome-assembled genomes of three Hepatoplasmataceae provide insights into isopod-mollicute symbiosis
Effective publication
Kawato et al., 2023, Metagenome-assembled genomes of three Hepatoplasmataceae provide insights into isopod-mollicute symbiosis



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  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license