Genome sc|0000814


Database

NCBI Assembly

Accession

GCF_004120195.1

Genomics

Accession
NCBI Assembly:GCF_004120195.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 1.9%
  • Quality: 90.5
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
124.0 ×
Source
Other features
  • G+C Content: 48.0%
  • Coding Density: 86.5%
  • Codon Table: 11
  • N50: 283,124 bp
  • Contigs: 52
  • Largest Contig: 581,255 bp
  • Assembly Length: 5,371,326 bp
  • Ambiguous Assembly Fraction: 1.9e-05%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2016-05
Location
Not detected
Toponym
Geo Loc Name: Brazil: Rio de Janeiro, Arraial do Cabo
Environment
Sample Type: cell culture
Isolation Source: liver
Other
Host: Sphoeroides spengleri
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples

Metadata retrieved 3 months ago


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