Genome sc|0000070

Name

Pristimantibacillus lignocellulolyticus^Ts

Database

INSDC Nucleotide

Accession

CP097899

Genomics

Accession

INSDC Nucleotide:CP097899

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

Completeness: 98.0%
Contamination: 0.7%
Quality: 94.5

Ribosomal and transfer RNA genes

8 16S rRNAs (up to 100.0%)
8 23S rRNAs (up to 100.0%)
tRNAs for 89 amino acids

Sequencing depth

123.0 ×

Source

BioSample: SAMN28659477

Other features

G+C Content: 37.8%
Coding Density: 85.47%
Codon Table: 11
N50: 5,268,630 bp
Contigs: 1
Largest Contig: 5,268,630 bp
Assembly Length: 5,268,630 bp
Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

Sample Metadata

Date

Collection Date: not available

Location

Lat Lon: 5.931 N 73.304 W

Toponym

Geo Loc Name: Colombia:Gambita

Environment

Isolation Source: decomposition metagenome

Env Broad Scale: ENVO:00002261

Env Local Scale: ENVO:00002261

Env Medium: ENVO:00001998

Other

Not detected

Package

Ncbi Submission Package: MIMAG.5.0

Biosamplemodel: MIMAG

Additional Accessions

SAMN28657967, SAMN28657968, SAMN28657969

All retrieved samples

SAMN28659477: MIMAG Metagenome-assembled Genome sample from Bacillaceae bacterium

Metadata retrieved 4 months ago

© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license