Genome sc|0000453

Genomics

Accession

NCBI Assembly:GCA_001899315.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 97.44%
• Contamination: 2.28%
• Quality: 86.04

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

20.0 ×

Source

• BioSample: SAMN05890506
• BioSample: SAMN05935458

Other features

• G+C Content: 49.42%
• Coding Density: 89.53%
• Codon Table: 11
• N50: 3,231,268 bp
• Contigs: 8
• Largest Contig: 3,231,268 bp
• Assembly Length: 5,494,645 bp
• Ambiguous Assembly Fraction: 0.53%

Automated checks

Complete

Sample Metadata

Date

Collection Date: 2011-02-16

Location

Lat Lon: 27.4954 S 153.01199999 E

Toponym

Geo Loc Name: Australia: Brisbane

Environment

Sample Type: metagenomic assembly

Isolation Source: Activated sludge was sampled from two, 4-l enhanced biological phosphorus removal (EBPR) sequencing batch reactors seeded from Thornside Wastewater Treatment Plant, Queensland

Other

Not detected

Package

Ncbi Submission Package: Metagenome.environmental.1.0

Biosamplemodel: Metagenome or environmental

All retrieved samples

• SAMN05890506: Metagenome or environmental sample from an enhanced biological phosphorous removal sequencing batch reactor
• SAMN05935458: Metagenome or environmental sample from activated sludge metagenome

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Metadata retrieved 4 months ago