JSON

Genome sc|0000415

Name

Acherontichlamydia pituitaeTs

Database

NCBI Assembly

Accession

GCA_019634675.1

Genomics

Accession
NCBI Assembly:GCA_019634675.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.96%
  • Contamination: 0.68%
  • Quality: 93.56
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
20.0 ×
Source
Other features
  • G+C Content: 46.5%
  • Coding Density: 89.76%
  • Codon Table: 11
  • N50: 366,247 bp
  • Contigs: 21
  • Largest Contig: 1,079,985 bp
  • Assembly Length: 2,665,416 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
CheckM was used to calculate completeness and contamination
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2018-07-10
Location
Lat Lon: 23.32 N 114.17 E
Toponym
Geo Loc Name: Hong Kong
Environment
Isolation Source: ACE-degrading consortia seeded with activated sludge sampled from 6 local waste water treatment plants (WWTPs)
Other
Rel To Oxygen: aerobe
Package
Ncbi Submission Package: Metagenome.environmental.1.0
Biosamplemodel: Metagenome or environmental
All retrieved samples
Metadata retrieved 4 months ago


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