Genome sc|0001585


Database

INSDC Nucleotide

Accession

SHNP00000000.1

Genomics

Accession
INSDC Nucleotide:SHNP00000000.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.57%
  • Contamination: 0.54%
  • Quality: 96.87
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
367.4 ×
Source
Other features
  • G+C Content: 52.9%
  • Coding Density: 91.16%
  • Codon Table: 11
  • N50: 672,971 bp
  • Contigs: 22
  • Largest Contig: 1,114,554 bp
  • Assembly Length: 4,356,674 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2009-04-30
Location
Lat Lon: 38.23 N 128.68 E
Toponym
Geo Loc Name: South Korea
Environment
Env Broad Scale: mairne coastal biomes
Env Local Scale: surface layer
Env Medium: seawater
Other
Depth: 10 m
Package
Ncbi Submission Package: MIGS.ba.water.6.0
Biosamplemodel: MIGS.ba
All retrieved samples

Metadata retrieved 26 days ago


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