JSON

Genome sc|0001584

Name

Paraluminiphilus aquimarisTs

Database

INSDC Nucleotide

Accession

CP036501.1

Genomics

Accession
INSDC Nucleotide:CP036501.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 95.93%
  • Contamination: 0.44%
  • Quality: 93.73
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
416.5 ×
Source
Other features
  • G+C Content: 52.7%
  • Coding Density: 91.96%
  • Codon Table: 11
  • N50: 2,724,458 bp
  • Contigs: 1
  • Largest Contig: 2,724,458 bp
  • Assembly Length: 2,724,458 bp
  • Ambiguous Assembly Fraction: 0.0037%
Submitter comments
The Prokaryotic Genome Annotation Pipeline (PGAP) was used to identify tRNA and rRNA genes. Completion and contamination were estimated by CheckM.
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2017-02-23
Location
Lat Lon: 38.23 N 128.67 E
Toponym
Geo Loc Name: South Korea
Environment
Env Broad Scale: mairne coastal biomes
Env Local Scale: surface layer
Env Medium: seawater
Other
Depth: 10 m
Package
Ncbi Submission Package: MIGS.ba.water.6.0
Biosamplemodel: MIGS.ba
All retrieved samples
Metadata retrieved about 1 month ago


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