JSON

Genome sc|0001487

Name

Shikimatogenerans silvanidophilusTs

Database

NCBI Assembly

Accession

GCA_018200315.1

Genomics

Accession
NCBI Assembly:GCA_018200315.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
120.0 ×
Source
Other features
  • G+C Content: 16.0%
  • Coding Density: 83.91%
  • Codon Table: 11
  • N50: 31,911 bp
  • Contigs: 13
  • Largest Contig: 74,813 bp
  • Assembly Length: 307,680 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2014
Location
Lat Lon: 51.010154 N 13.873796 E
Toponym
Geo Loc Name: Germany: Berlin
Environment
Isolation Source: beetle abdomen
Other
Host: Oryzaephilus surinamensis
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 4 months ago


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