Genome sc|0001480


Database

NCBI Assembly

Accession

GCA_942492895.1

Genomics

Accession
NCBI Assembly:GCA_942492895.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 90.01%
  • Contamination: 0.67%
  • Quality: 86.66
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
39.0 ×
Source
Other features
  • G+C Content: 47.14%
  • Coding Density: 86.44%
  • Codon Table: 11
  • N50: 4,075,262 bp
  • Contigs: 1
  • Largest Contig: 4,075,262 bp
  • Assembly Length: 4,075,262 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Single-contig hybrid assembly from Illumina and Nanopore reads, quality check by CheckM2
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2021
Location
Not detected
Toponym
Geographic Location Country And Or Sea: Denmark
Environment
Isolation Source: Marine sediment
Environment Biome: aquatic biome
Environment Feature: marine
Other
Not detected
Package
Ena Checklist: ERC000011
All retrieved samples

Metadata retrieved 3 months ago


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