Genome sc|0001479


Database

NCBI Assembly

Accession

GCA_942491045.1

Genomics

Accession
NCBI Assembly:GCA_942491045.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 90.01%
  • Contamination: 3.55%
  • Quality: 72.26
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 18 amino acids
Sequencing depth
619.0 ×
Source
Other features
  • G+C Content: 47.53%
  • Coding Density: 86.21%
  • Codon Table: 11
  • N50: 899,093 bp
  • Contigs: 9
  • Largest Contig: 1,305,763 bp
  • Assembly Length: 4,029,898 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
medium-quality MAG from hybrid assembly (9 contigs) of Illumina and Nanopore reads. Quality check by CheckM2.
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2021
Location
Not detected
Toponym
Geographic Location Country And Or Sea: Denmark
Environment
Isolation Source: Marine sediment
Environment Biome: aquatic biome
Environment Feature: marine
Other
Not detected
Package
Ena Checklist: ERC000011
All retrieved samples

Metadata retrieved 3 months ago


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