JSON

Genome sc|0001460

Name

Enterococcus dunnyi

Database

NCBI Assembly

Accession

GCA_002174455.1

Genomics

Accession
NCBI Assembly:GCA_002174455.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 4.7%
  • Quality: 76.5
Ribosomal and transfer RNA genes
  • 3 16S rRNAs (up to 100.0%)
  • 4 23S rRNAs (up to 100.0%)
  • tRNAs for 17 amino acids
Sequencing depth
93.0 ×
Source
Other features
  • G+C Content: 36.12%
  • Coding Density: 87.27%
  • Codon Table: 11
  • N50: 1,274,976 bp
  • Contigs: 7
  • Largest Contig: 1,435,713 bp
  • Assembly Length: 3,615,898 bp
  • Ambiguous Assembly Fraction: 4.25%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015
Location
Not detected
Toponym
Geo Loc Name: USA: Arizona
Environment
Isolation Source: intestinal contents
Other
Host: Insect
Package
Ncbi Submission Package: Pathogen.cl.1.0
Biosamplemodel: Pathogen.cl
All retrieved samples
Metadata retrieved 4 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license