JSON

Genome sc|0001459

Name

Enterococcus murrayae

Database

NCBI Assembly

Accession

GCA_017315985.1

Genomics

Accession
NCBI Assembly:GCA_017315985.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 6.6%
  • Quality: 66.1
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 39.8%
  • Coding Density: 87.38%
  • Codon Table: 11
  • N50: 87,626 bp
  • Contigs: 104
  • Largest Contig: 320,824 bp
  • Assembly Length: 4,859,630 bp
  • Ambiguous Assembly Fraction: 0.0049%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2014-12
Location
Not detected
Toponym
Geo Loc Name: USA:Massachusetts
Environment
Sample Type: isolate
Isolation Source: cloacal & blood material from turtle
Other
Host: Kemp's ridley turtle
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 4 months ago


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