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cognitis nomina
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Genome sc|0001453
Name
Enterococcus lowellii
Database
NCBI Assembly
Accession
GCA_017426705.1
Genomics
Accession
NCBI Assembly:
GCA_017426705.1
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
4.7%
Quality:
76.5
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
BioSample: SAMN09399637
Other features
G+C Content:
35.58%
Coding Density:
88.61%
Codon Table:
11
N50:
398,042 bp
Contigs:
12
Largest Contig:
781,546 bp
Assembly Length:
3,200,151 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Sample Metadata
Date
Collection Date:
2014
Location
Not detected
Toponym
Geo Loc Name:
Germany
Environment
Isolation Source:
feces
Other
Host:
cockatoo
Package
Ncbi Submission Package:
Pathogen.cl.1.0
Biosamplemodel:
Pathogen.cl
All retrieved samples
SAMN09399637
: Diversity library
Metadata retrieved
4 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN09399637
×
strain
DIV2402
INSDC secondary accession
SRS19430780
NCBI submission package
Pathogen.cl.1.0
organism
Enterococcus sp. DIV2402
collection date
2014
isolation source
feces
collected by
Gilmore lab - Harvard Med School
geo loc name
Germany
host
cockatoo
BioSampleModel
Pathogen.cl
ENA-FIRST-PUBLIC
2018-06-12
ENA-LAST-UPDATE
2023-11-06
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