Genome sc|0001450


Database

NCBI Assembly

Accession

GCA_002148425.1

Genomics

Accession
NCBI Assembly:GCA_002148425.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 4.7%
  • Quality: 76.5
Ribosomal and transfer RNA genes
  • 3 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
82.0 ×
Source
Other features
  • G+C Content: 34.26%
  • Coding Density: 85.6%
  • Codon Table: 11
  • N50: 3,698,428 bp
  • Contigs: 8
  • Largest Contig: 3,698,428 bp
  • Assembly Length: 3,732,430 bp
  • Ambiguous Assembly Fraction: 5.66%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015
Location
Not detected
Toponym
Geo Loc Name: Brazil
Environment
Isolation Source: feces
Other
Host: Insect
Package
Ncbi Submission Package: Pathogen.cl.1.0
Biosamplemodel: Pathogen.cl
All retrieved samples

Metadata retrieved 3 months ago


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