JSON

Genome sc|0001447

Name

Vagococcus giribetii

Database

NCBI Assembly

Accession

GCA_017316185.1

Genomics

Accession
NCBI Assembly:GCA_017316185.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 1.9%
  • Quality: 89.6
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 11 amino acids
Sequencing depth
103.0 ×
Source
Other features
  • G+C Content: 34.59%
  • Coding Density: 89.61%
  • Codon Table: 11
  • N50: 95,474 bp
  • Contigs: 52
  • Largest Contig: 250,629 bp
  • Assembly Length: 2,728,262 bp
  • Ambiguous Assembly Fraction: 0.036%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2014
Location
Not detected
Toponym
Geo Loc Name: USA
Environment
Isolation Source: water
Other
Not detected
Package
Ncbi Submission Package: Pathogen.cl.1.0
Biosamplemodel: Pathogen.cl
All retrieved samples
Metadata retrieved 4 months ago


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