JSON

Genome sc|0001368

Name

Nocardia canadensis

Database

NCBI Assembly

Accession

GCF_032656385.1

Genomics

Accession
NCBI Assembly:GCF_032656385.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.1%
  • Contamination: 4.7%
  • Quality: 74.6
Ribosomal and transfer RNA genes
  • 5 16S rRNAs (up to 100.0%)
  • 5 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 69.55%
  • Coding Density: 89.87%
  • Codon Table: 11
  • N50: 2,014,676 bp
  • Contigs: 10
  • Largest Contig: 2,106,583 bp
  • Assembly Length: 7,150,690 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015-08-13
Location
Not detected
Toponym
Geo Loc Name: Canada: Varennes, QC
Environment
Sample Type: Bacterial culture
Env Broad Scale: Pertoleum hydrocarbon contaminated iste
Other
Host: Salix purpurea
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 4 months ago


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