AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
    • AAI clade 9-1 medoid: GCF 003347605 1
    • AAI clade 9-2 medoid: GCA 003247185 1
    • AAI clade 9-3 medoid: GCA 007134085 1
    • AAI clade 9-4 medoid: GCF 002933815 1
    • AAI clade 9-5 medoid: GCF 014352875 1
    • AAI clade 9-6 medoid: GCF 009754945 1
    • AAI clade 9-7 medoid: GCF 002886045 1
      • AAI clade 9-7-1 medoid: GCF 002886045 1
        • AAI clade 9-7-1-1 medoid: GCF 000518485 1
        • AAI clade 9-7-1-2 medoid: GCF 002886045 1
          • AAI clade 9-7-1-2-1 medoid: GCA 001874335 1
          • AAI clade 9-7-1-2-2 medoid: GCF 014526325 1
          • AAI clade 9-7-1-2-3 medoid: GCF 003610635 1
          • AAI clade 9-7-1-2-4 medoid: GCA 002169865 1
          • AAI clade 9-7-1-2-5 medoid: GCF 002806995 1
          • AAI clade 9-7-1-2-6 medoid: GCF 003148645 1
          • AAI clade 9-7-1-2-7 medoid: GCA 002426015 1
            3 datasets: GCA 002426015 1 (AAI: 100.0%), GCA 002426755 1 (AAI: 72.86%), and GCF 014641635 1 (AAI: 77.97%)
          • AAI clade 9-7-1-2-8 medoid: GCF 016827605 1
          • AAI clade 9-7-1-2-9 medoid: GCF 011762485 1
          • AAI clade 9-7-1-2-10 medoid: GCA 002477625 1
          • AAI clade 9-7-1-2-11 medoid: GCA 002684355 1
          • AAI clade 9-7-1-2-12 medoid: GCA 002693745 1
          • AAI clade 9-7-1-2-13 medoid: GCA 002697625 1
          • AAI clade 9-7-1-2-14 medoid: GCA 002707525 1
          • AAI clade 9-7-1-2-15 medoid: GCA 002721175 1
          • AAI clade 9-7-1-2-16 medoid: GCA 002725015 1
          • AAI clade 9-7-1-2-17 medoid: GCF 011777505 1
          • AAI clade 9-7-1-2-18 medoid: GCA 003709165 1
          • AAI clade 9-7-1-2-19 medoid: GCA 018674025 1
          • AAI clade 9-7-1-2-20 medoid: GCA 006383075 2
          • AAI clade 9-7-1-2-21 medoid: GCA 011526275 1
          • AAI clade 9-7-1-2-22 medoid: GCF 000789235 1
          • AAI clade 9-7-1-2-23 medoid: GCA 013001285 1
          • AAI clade 9-7-1-2-24 medoid: GCA 013001365 1
          • AAI clade 9-7-1-2-25 medoid: GCA 013003555 1
          • AAI clade 9-7-1-2-26 medoid: GCA 013042625 1
          • AAI clade 9-7-1-2-27 medoid: GCA 013042715 1
          • AAI clade 9-7-1-2-28 medoid: GCA 013042825 1
          • AAI clade 9-7-1-2-29 medoid: GCA 013043005 1
          • AAI clade 9-7-1-2-30 medoid: GCA 013215095 1
          • AAI clade 9-7-1-2-31 medoid: GCA 015476115 1
          • AAI clade 9-7-1-2-32 medoid: GCA 016744755 1
          • AAI clade 9-7-1-2-33 medoid: GCA 018608625 1
          • AAI clade 9-7-1-2-34 medoid: GCF 001735745 1
          • AAI clade 9-7-1-2-35 medoid: GCA 018664745 1
          • AAI clade 9-7-1-2-36 medoid: GCA 900104375 1
          • AAI clade 9-7-1-2-37 medoid: GCA 900112395 1
          • AAI clade 9-7-1-2-38 medoid: GCA 902511755 1
          • AAI clade 9-7-1-2-39 medoid: GCA 902514225 1
          • AAI clade 9-7-1-2-40 medoid: GCA 902517245 1
          • AAI clade 9-7-1-2-41 medoid: GCA 905182835 1
          • AAI clade 9-7-1-2-42 medoid: GCA 905479065 1
          • AAI clade 9-7-1-2-43 medoid: GCF 900112595 1
          • AAI clade 9-7-1-2-44 medoid: GCF 000224335 1
          • AAI clade 9-7-1-2-45 medoid: GCF 007997285 1
          • AAI clade 9-7-1-2-46 medoid: GCF 014596975 1
          • AAI clade 9-7-1-2-47 medoid: GCF 001439665 1
          • AAI clade 9-7-1-2-48 medoid: GCF 000733475 1
          • AAI clade 9-7-1-2-49 medoid: GCF 017814435 1
          • AAI clade 9-7-1-2-50 medoid: GCF 000943565 1
          • AAI clade 9-7-1-2-51 medoid: GCF 001280505 1
          • AAI clade 9-7-1-2-52 medoid: GCF 001280515 1
          • AAI clade 9-7-1-2-53 medoid: GCF 001642835 1
          • AAI clade 9-7-1-2-54 medoid: GCF 004358095 2
          • AAI clade 9-7-1-2-55 medoid: GCF 012910715 1
          • AAI clade 9-7-1-2-56 medoid: GCF 002895005 1
          • AAI clade 9-7-1-2-57 medoid: GCF 002954355 1
          • AAI clade 9-7-1-2-58 medoid: GCF 017581925 1
          • AAI clade 9-7-1-2-59 medoid: GCF 004804355 1
          • AAI clade 9-7-1-2-60 medoid: GCF 010671565 1
        • AAI clade 9-7-1-3 medoid: GCA 902626365 1
      • AAI clade 9-7-2 medoid: GCF 013403915 1
    • AAI clade 9-8 medoid: GCA 017983975 1
    • AAI clade 9-9 medoid: GCA 002715485 1
    • AAI clade 9-10 medoid: GCA 002699205 1
    • AAI clade 9-11 medoid: GCF 003014695 1
    • AAI clade 9-12 medoid: GCA 902594485 1
    • AAI clade 9-13 medoid: GCA 016777965 1
    • AAI clade 9-14 medoid: GCF 007655305 1
    • AAI clade 9-15 medoid: GCA 903887845 1
    • AAI clade 9-16 medoid: GCA 016222975 1
    • AAI clade 9-17 medoid: GCA 016786885 1
    • AAI clade 9-18 medoid: GCA 017303795 1
    • AAI clade 9-19 medoid: GCF 015351595 1
    • AAI clade 9-20 medoid: GCA 002389765 1
    • AAI clade 9-21 medoid: GCA 013214355 1
    • AAI clade 9-22 medoid: GCF 011089895 1
    • AAI clade 9-23 medoid: GCA 013391385 1
    • AAI clade 9-24 medoid: GCF 018613605 1
    • AAI clade 9-25 medoid: GCA 016708845 1
    • AAI clade 9-26 medoid: GCF 900156415 1
    • AAI clade 9-27 medoid: GCF 004349195 1
    • AAI clade 9-28 medoid: GCF 012516355 1
    • AAI clade 9-29 medoid: GCF 000520975 1
    • AAI clade 9-30 medoid: GCA 016712535 1
    • AAI clade 9-31 medoid: GCF 003944715 1
    • AAI clade 9-32 medoid: GCF 014251635 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1