AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
    • AAI clade 9-1 medoid: GCF 003347605 1
      • AAI clade 9-1-1 medoid: GCF 900143185 1
      • AAI clade 9-1-2 medoid: GCF 003860565 1
        5 datasets: GCF 003860565 1 (AAI: 100.0%), GCA 002337005 1 (AAI: 71.93%), GCA 017995195 1 (AAI: 66.37%), GCF 014645495 1 (AAI: 77.69%), and GCF 907163105 1 (AAI: 96.76%)
      • AAI clade 9-1-3 medoid: GCF 015191005 1
      • AAI clade 9-1-4 medoid: GCA 002434285 1
      • AAI clade 9-1-5 medoid: GCA 002453895 1
      • AAI clade 9-1-6 medoid: GCA 002378465 1
      • AAI clade 9-1-7 medoid: GCA 002383165 1
      • AAI clade 9-1-8 medoid: GCF 003336205 1
      • AAI clade 9-1-9 medoid: GCF 003347605 1
      • AAI clade 9-1-10 medoid: GCF 900078205 2
      • AAI clade 9-1-11 medoid: GCF 009670965 1
      • AAI clade 9-1-12 medoid: GCF 001675285 1
      • AAI clade 9-1-13 medoid: GCF 000265465 1
      • AAI clade 9-1-14 medoid: GCF 900110605 1
      • AAI clade 9-1-15 medoid: GCF 003815655 1
      • AAI clade 9-1-16 medoid: GCF 900115055 1
      • AAI clade 9-1-17 medoid: GCF 011082725 1
    • AAI clade 9-2 medoid: GCA 003247185 1
    • AAI clade 9-3 medoid: GCA 007134085 1
    • AAI clade 9-4 medoid: GCF 002933815 1
    • AAI clade 9-5 medoid: GCF 014352875 1
    • AAI clade 9-6 medoid: GCF 009754945 1
    • AAI clade 9-7 medoid: GCF 002886045 1
    • AAI clade 9-8 medoid: GCA 017983975 1
    • AAI clade 9-9 medoid: GCA 002715485 1
    • AAI clade 9-10 medoid: GCA 002699205 1
    • AAI clade 9-11 medoid: GCF 003014695 1
    • AAI clade 9-12 medoid: GCA 902594485 1
    • AAI clade 9-13 medoid: GCA 016777965 1
    • AAI clade 9-14 medoid: GCF 007655305 1
    • AAI clade 9-15 medoid: GCA 903887845 1
    • AAI clade 9-16 medoid: GCA 016222975 1
    • AAI clade 9-17 medoid: GCA 016786885 1
    • AAI clade 9-18 medoid: GCA 017303795 1
    • AAI clade 9-19 medoid: GCF 015351595 1
    • AAI clade 9-20 medoid: GCA 002389765 1
    • AAI clade 9-21 medoid: GCA 013214355 1
    • AAI clade 9-22 medoid: GCF 011089895 1
    • AAI clade 9-23 medoid: GCA 013391385 1
    • AAI clade 9-24 medoid: GCF 018613605 1
    • AAI clade 9-25 medoid: GCA 016708845 1
    • AAI clade 9-26 medoid: GCF 900156415 1
    • AAI clade 9-27 medoid: GCF 004349195 1
    • AAI clade 9-28 medoid: GCF 012516355 1
    • AAI clade 9-29 medoid: GCF 000520975 1
    • AAI clade 9-30 medoid: GCA 016712535 1
    • AAI clade 9-31 medoid: GCF 003944715 1
    • AAI clade 9-32 medoid: GCF 014251635 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1