AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
    • AAI clade 8-1 medoid: GCA 904418825 1
    • AAI clade 8-2 medoid: GCF 016316925 1
    • AAI clade 8-3 medoid: GCF 900113965 1
    • AAI clade 8-4 medoid: GCA 900547475 1
    • AAI clade 8-5 medoid: GCA 012728125 1
      • AAI clade 8-5-1 medoid: GCA 015486705 1
      • AAI clade 8-5-2 medoid: GCF 009696605 1
      • AAI clade 8-5-3 medoid: GCA 000989565 1
      • AAI clade 8-5-4 medoid: GCA 001282665 1
      • AAI clade 8-5-5 medoid: GCA 001769975 1
      • AAI clade 8-5-6 medoid: GCA 001772615 1
      • AAI clade 8-5-7 medoid: GCA 001772625 1
      • AAI clade 8-5-8 medoid: GCA 001772985 1
      • AAI clade 8-5-9 medoid: GCA 001773215 1
      • AAI clade 8-5-10 medoid: GCA 001773295 1
      • AAI clade 8-5-11 medoid: GCA 001783275 1
      • AAI clade 8-5-12 medoid: GCA 016201905 1
      • AAI clade 8-5-13 medoid: GCA 001784565 1
      • AAI clade 8-5-14 medoid: GCA 001787465 1
      • AAI clade 8-5-15 medoid: GCA 001816835 1
      • AAI clade 8-5-16 medoid: GCA 015711775 1
      • AAI clade 8-5-17 medoid: GCA 002313635 1
      • AAI clade 8-5-18 medoid: GCA 002328805 1
      • AAI clade 8-5-19 medoid: GCA 002392265 1
      • AAI clade 8-5-20 medoid: GCA 002412625 1
      • AAI clade 8-5-21 medoid: GCA 002703265 1
      • AAI clade 8-5-22 medoid: GCA 002770755 1
      • AAI clade 8-5-23 medoid: GCA 002771035 1
      • AAI clade 8-5-24 medoid: GCA 002771215 1
      • AAI clade 8-5-25 medoid: GCA 002773985 1
      • AAI clade 8-5-26 medoid: GCA 002774285 1
      • AAI clade 8-5-27 medoid: GCA 002793435 1
      • AAI clade 8-5-28 medoid: GCA 002841685 1
      • AAI clade 8-5-29 medoid: GCA 003167475 1
      • AAI clade 8-5-30 medoid: GCA 902572065 1
      • AAI clade 8-5-31 medoid: GCA 003246855 1
      • AAI clade 8-5-32 medoid: GCA 003599795 1
      • AAI clade 8-5-33 medoid: GCA 003265885 1
      • AAI clade 8-5-34 medoid: GCA 003265975 1
      • AAI clade 8-5-35 medoid: GCA 005798285 1
      • AAI clade 8-5-36 medoid: GCA 007135805 1
      • AAI clade 8-5-37 medoid: GCA 007136035 1
      • AAI clade 8-5-38 medoid: GCF 016820655 1
      • AAI clade 8-5-39 medoid: GCA 009777575 1
      • AAI clade 8-5-40 medoid: GCA 009885355 1
      • AAI clade 8-5-41 medoid: GCA 012735585 1
      • AAI clade 8-5-42 medoid: GCA 012728125 1
        5 datasets: GCA 012519355 1 (AAI: 75.68%), GCA 012728125 1 (AAI: 100.0%), GCA 012735245 1 (AAI: 71.27%), GCA 014385195 1 (AAI: 57.55%), and GCF 000223315 1 (AAI: 49.07%)
      • AAI clade 8-5-43 medoid: GCA 012519495 1
      • AAI clade 8-5-44 medoid: GCA 012735405 1
      • AAI clade 8-5-45 medoid: GCA 012728755 1
      • AAI clade 8-5-46 medoid: GCA 012798115 1
      • AAI clade 8-5-47 medoid: GCA 013286205 1
      • AAI clade 8-5-48 medoid: GCF 003570995 1
      • AAI clade 8-5-49 medoid: GCA 018434075 1
      • AAI clade 8-5-50 medoid: GCF 016592575 1
      • AAI clade 8-5-51 medoid: GCA 016204945 1
      • AAI clade 8-5-52 medoid: GCA 016206485 1
      • AAI clade 8-5-53 medoid: GCA 016288255 1
      • AAI clade 8-5-54 medoid: GCA 016783985 1
      • AAI clade 8-5-55 medoid: GCA 016784355 1
      • AAI clade 8-5-56 medoid: GCA 016839105 1
      • AAI clade 8-5-57 medoid: GCA 016927995 1
      • AAI clade 8-5-58 medoid: GCA 016928195 1
      • AAI clade 8-5-59 medoid: GCA 016929645 1
      • AAI clade 8-5-60 medoid: GCA 016932045 1
      • AAI clade 8-5-61 medoid: GCA 016937935 1
      • AAI clade 8-5-62 medoid: GCA 017396025 1
      • AAI clade 8-5-63 medoid: GCA 017510305 1
      • AAI clade 8-5-64 medoid: GCA 017534025 1
      • AAI clade 8-5-65 medoid: GCA 017993345 1
      • AAI clade 8-5-66 medoid: GCA 017995665 1
      • AAI clade 8-5-67 medoid: GCA 018058425 1
      • AAI clade 8-5-68 medoid: GCA 018648405 1
      • AAI clade 8-5-69 medoid: GCA 018816885 1
      • AAI clade 8-5-70 medoid: GCA 900543165 1
      • AAI clade 8-5-71 medoid: GCA 900556425 1
      • AAI clade 8-5-72 medoid: GCA 903877885 1
      • AAI clade 8-5-73 medoid: GCA 903879985 1
      • AAI clade 8-5-74 medoid: GCA 903886985 1
      • AAI clade 8-5-75 medoid: GCA 903907475 1
      • AAI clade 8-5-76 medoid: GCF 900176115 1
      • AAI clade 8-5-77 medoid: GCF 900128955 1
    • AAI clade 8-6 medoid: GCA 001000865 1
    • AAI clade 8-7 medoid: GCA 002786595 1
    • AAI clade 8-8 medoid: GCF 000173795 1
    • AAI clade 8-9 medoid: GCF 000159695 1
    • AAI clade 8-10 medoid: GCF 017161305 1
    • AAI clade 8-11 medoid: GCA 009785215 1
    • AAI clade 8-12 medoid: GCF 018223745 1
    • AAI clade 8-13 medoid: GCF 000266865 1
    • AAI clade 8-14 medoid: GCA 016281495 1
    • AAI clade 8-15 medoid: GCF 018861905 1
    • AAI clade 8-16 medoid: GCA 015056885 1
    • AAI clade 8-17 medoid: GCA 017936375 1
    • AAI clade 8-18 medoid: GCF 001436755 1
    • AAI clade 8-19 medoid: GCF 018437235 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1